| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1857 |
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| Symbol | |
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| ID | 5709614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1933266 |
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| End bp | 1934072 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641276364 |
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| Product | shikimate kinase |
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| Protein accession | YP_001541664 |
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| Protein GI | 159042412 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1685] Archaeal shikimate kinase |
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| TIGRFAM ID | [TIGR01920] shikimate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTACA CGACCTACGG GGGTGTCTCA ATAATTAATG CAATACCGTC ATTGAGAGGA
GGCACTATGG CTATTGACCT ACCTGTTAGG GTTAATGTAA GTAGGGGTGG GTGCTCGATG
GATGAATTCA CATCATTCAT AGTTAAGTAC GCCTCAGCGA AATTAGGTGT TAGGGAGGAG
TACTGTATTA GGGTTAATAG TAATGTACCA ATGGCTAGTG GTTTAAAGAG TAATAGTGCG
GTGGCGGTTG GGGTAACCTA CGCGTTAGCA GAGGTAAGTA AGGTTGGGTT AAGTAAAATT
AATGTAATTA GAATTGCCGC TGAGGCAACT AAGGCTCATG GTTCATCAAT AACAGGGGCA
TTTGATGATG CATCAGCATC ACTGCTAGGG GGAGTAGTGT TGACTGATAA TAGGCTTATG
AAGGTGATTA AGCATATTAA CCCACCTAAT GATGTAGTGG TAGTTGTGAC TGGGTTTAAG
GAGGGTAAGA AGGCCATTAA TGTTGATGCC TTAAAGAGTT TAAGCAGTAT TTACCATGAT
TTAGTGCATT GGGTGTTGGA GGGTAGGTTA TGGGAGGCTG CGACAATTAA TGGTATTATG
GTGGCTAAGG TACTTGGCTA CATTAAGCAA TTAAGCGCAA TCGGTGAAGC CTTAGGTAAG
GGGGCCTTGG CTGCTGGTGT GAGTGGTAAT GGTCCATCAA TCTACGCGGT TTTTAAAACC
GGTGAGGAGG GGCCTTACGT TGATTACGTT AATGAGCATT GGGGTTACTT AATACTCACT
AAGCCTATTC CAGCGTTAAT TAATTAA
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| Protein sequence | MEYTTYGGVS IINAIPSLRG GTMAIDLPVR VNVSRGGCSM DEFTSFIVKY ASAKLGVREE
YCIRVNSNVP MASGLKSNSA VAVGVTYALA EVSKVGLSKI NVIRIAAEAT KAHGSSITGA
FDDASASLLG GVVLTDNRLM KVIKHINPPN DVVVVVTGFK EGKKAINVDA LKSLSSIYHD
LVHWVLEGRL WEAATINGIM VAKVLGYIKQ LSAIGEALGK GALAAGVSGN GPSIYAVFKT
GEEGPYVDYV NEHWGYLILT KPIPALIN
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