| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1240 |
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| Symbol | |
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| ID | 5709542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1310987 |
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| End bp | 1312036 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641275745 |
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| Product | hypothetical protein |
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| Protein accession | YP_001541057 |
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| Protein GI | 159041805 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
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| TIGRFAM ID | [TIGR00748] hydroxymethylglutaryl-CoA synthase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0625222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00968227 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGGTAG GCATAGTTGG TTGGGGTGCG TACATACCTA GGTATAGGAT TAAGACCCGT
GAAATAGCTG AGGCTTGGGG TGATGATGCC CTCAGGATTA GGGACATGTA CTTGGTTGAG
GAGAAGGCGG TTGGGTACAT TGACGAGGAC CCAGTAACCA TGGCTGTTGA AGCCTCTAGG
GACGCTTTAA TTAGGGCTGG GGTGAAGCCG AGTGAGGTTG GTGCAGTCTT CGCTGGAACT
GAGTCAAAAC CCTACGCCGT TAAGCCGATA TCATCAATAC TCATTGATGC CCTAGGCCTA
AATAGGCAGG TTTACTCAGT GGACATGGAG TTCGCCTGTA AGGCTGGTTC AGATGCAATA
ATTAACCTAA TGGGTTTAGT TAAGGCTAAT TCAATAAAGT ACGGTATAGC AGTGGGGACT
GATTCATCCC AGGGTGAACC GGGGGAGCAC TTGGAGTACA CCGTGGGTAC TGGCGCAGTC
GCATACGTGA TTGGTTCAAG TAACCTGGCC GCTGAAATCA AGTACACTTA CCCATATGCA
TCAGACACCC CTGACTTCTG GAGGAGGGAT AGTTCACCCT ACCCAGTTCA CGGTGAAGGC
TTCACAGGGG AGCCGGCTTA CTTCAAGCAC ATTATAGGTG CTGCTAAGGG TTTAATGGAT
GAGTTAGGTA TGAAGCCCAA TGACTTCGAT TACGCAGTCT TCCACCAACC CAACGCCAGG
TTCCCGGTTA GGGTTGCTCA AATGCTCGGC TTCCCGCTTG AGAAGGTTAA GCCAGGTATA
GTGGTTGATT TAATAGGCAA TACTTACAAT GCCTCAGCAT TACTGGGTTT AGCTAAGGTT
CTTGAGGAGG CTAAGCCTGG TGCCAAAATA ATAGTAGTCA CCTTCGGTAG CGGTGCAGGC
TCCAACGCAT TCTACATTGA AACCACTGAT CAATTACCAG GTAAGGTTAA GTTAGCTAGG
ACTATTGGTG AGATGCTTGA GGATAAGGTC TACATAGACT ACTCCCTGTA CTTAAAGTAC
AGGAAGATAA TTAAAATGAT ACACGGTTAA
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| Protein sequence | MAVGIVGWGA YIPRYRIKTR EIAEAWGDDA LRIRDMYLVE EKAVGYIDED PVTMAVEASR
DALIRAGVKP SEVGAVFAGT ESKPYAVKPI SSILIDALGL NRQVYSVDME FACKAGSDAI
INLMGLVKAN SIKYGIAVGT DSSQGEPGEH LEYTVGTGAV AYVIGSSNLA AEIKYTYPYA
SDTPDFWRRD SSPYPVHGEG FTGEPAYFKH IIGAAKGLMD ELGMKPNDFD YAVFHQPNAR
FPVRVAQMLG FPLEKVKPGI VVDLIGNTYN ASALLGLAKV LEEAKPGAKI IVVTFGSGAG
SNAFYIETTD QLPGKVKLAR TIGEMLEDKV YIDYSLYLKY RKIIKMIHG
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