| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1188 |
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| Symbol | |
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| ID | 5710422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1246954 |
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| End bp | 1248015 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641275690 |
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| Product | transcriptional regulator, TrmB |
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| Protein accession | YP_001541005 |
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| Protein GI | 159041753 |
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| COG category | [K] Transcription |
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| COG ID | [COG1378] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0102771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00221829 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTGTCTGA TGCAGGTAAT TGATGATGAT TTAGTGGATG CATTGACAAT CCTCGGCTTA
TCAAGGAAGG AAGCCACTGT ATTAGCGTAC CTACTCCTTA AGGGTAGTGC CACGGCTAGG
GAGATTATGG CTGATTTATC TATTCACCAG CCTCAATTAT ACAATATAAT GGTTTCACTT
GAGAGGAAGG GTTTCATTAA TGTTCAGCAG AGTAAGCCTA AGGTATATGC GCCAATAAGC
ATGGGGGTTA TAATGGAGAT GATTGAGGGT GAGATGCTTA AGCGTAAGCA AGCTGTGGTT
AAGGCATTAA CATCATTAAC CAGGGGTGAT AAGGCACGGA ACCTACTATG GGTTACTAGG
GGTATTGATA ACGTTATCTA TAATTCAGCA TCCTTAATCC AAGAGGCCAA CAGTGAATTA
TATGTATCAG CCCCACCAGT GTTATTGAGT AGGTTACTTA AGTACATGAG TAGCATTGAT
CCCAAGGTTA AGGCGTATAT TTTAGTGTAC CCTAGTTTAA ATGATGAATT GTTAAATGAA
TTGAAGGGTA TTAAGAGTGT TGTTGAGGTT AAGGTGAATA GGCTTGGCCC ATTCTACTTC
ATTTCACCAA ACGCGGAATC CTGCGTATTC GCATCCAGTA GGGTTAGTTT ACTTAGGGAA
CCTGAGACAT ACGGGTACGT GTTTAGAGAT AGGACAATGA CTCTTCAATT CATTCACGGA
TTCTTCGATA CATGGAGGCG GGCTCAGACG GTTTACAGGA GAGGCTTTAA GCCCTCTGAC
TACCCACTGG TTTTTAACTC ACATAGATTC GCCACGTGGG AGATCCTTAA GGCTAAGGAA
TCTAAGCTAA GCATTGAGGT TAGGGTTAAG GGCTACTTAA CGAGCAGTAA TGAGGAGGTT
GATGTAACTG GGATACCACT TAACGTAACG ATAGATAGTG ATATAGTGAA CTTTGAACTA
TTACCCAGTA ACGGCAATAA AGCATTACTC ATAGGTGGTA CTAACGCCTT AATTGAGGAT
ATTGAATCAG AGTACATTGA AATCAGACTT ATGAATCAAT AA
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| Protein sequence | MCLMQVIDDD LVDALTILGL SRKEATVLAY LLLKGSATAR EIMADLSIHQ PQLYNIMVSL
ERKGFINVQQ SKPKVYAPIS MGVIMEMIEG EMLKRKQAVV KALTSLTRGD KARNLLWVTR
GIDNVIYNSA SLIQEANSEL YVSAPPVLLS RLLKYMSSID PKVKAYILVY PSLNDELLNE
LKGIKSVVEV KVNRLGPFYF ISPNAESCVF ASSRVSLLRE PETYGYVFRD RTMTLQFIHG
FFDTWRRAQT VYRRGFKPSD YPLVFNSHRF ATWEILKAKE SKLSIEVRVK GYLTSSNEEV
DVTGIPLNVT IDSDIVNFEL LPSNGNKALL IGGTNALIED IESEYIEIRL MNQ
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