| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0080 |
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| Symbol | |
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| ID | 5710017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 93529 |
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| End bp | 95676 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641274583 |
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| Product | glycoside hydrolase family 42 protein |
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| Protein accession | YP_001539924 |
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| Protein GI | 159040672 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1874] Beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0820956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTTC CGGTTTCCGT ATGGTATGGT GTAGGTAGCG TTACCCCACT GTTTGATGAG
GAAACCATTA AGAGGGATTT AAAGAACATT AAGGAGGCTG GGTTTAAGTA TGTTAGGGGT
TGGGTTAACT GGAGGGATTC TGAACCAAGA CCCGGGGAGT ATGATTTCAG TGGAGTCGAG
AATCTGCTTA AGACCGCTAA CGACATTGGC TTAAGGGTTA TTCTTCAGGT TTACCTTGAA
TTCGCCCCCG ATTGGTTACC TAAGCTTCAC CCAGACTCAC TATACGTCTC TGAGTCAGGC
AGCGTTATCA TGCCTCAAGG TAGCCCTGGG GTTTGCCTTG ACCACCCTGG TGTTAGGGCT
AGGGCTGAGG AATTCATGAG GAAGCTGGCT CAAGTAGTGA TTAAGTACCC TAACTTCTAT
GTCTGGGACT TATGGAGTGA ACCCAATGTT ATTCAGTGGA TTTACCAACC CACTGGTTGG
CGTGGATTAT TCTGCTACTG CAATTACTCT AAGGGTAGGT TCAGGGATTG GTTAAAGACT
ATATACGGCA ACGTTAACAC GTTGAATAAG GCCTGGCATA GGAGTTACCT GGAGTTTAAT
GATGTTGAAC CACCGCGTTT CGTCTCCCTT CACTTCGCTA GGGATAACAT TGATTGGTTA
ACATTCAATA TAGTTAAGCT TAAGGAGGAC CTTGAATGGA GGGTTAAGGT AATTAGGAGT
ATTGATAATA ATCACCCAGT GGTTAGTCAT AGTCATGGCG GTACCTCAGT GTTCAGTAAT
CCACTCTTCG GTGAACCTGA TGATTGGGAA ATGGCCAGTG TGGTTGATGC ATGGGGTACA
TCATTTTACC CCAAGCACGC AGGTAGGGTT AAGGTTGACC ATGTTCTTGA CTCACTAGTA
CTTGATGCAG CTAGGTCAGC GGCATTAGCC AGTGGTAAAC CATACTGGAT AGGGGAGCTT
CAAGCTGGTC AAGGTGTTGG TGGGCTTAAG GCGGTTGAAC CAGTGACACC TGATGATGTG
GCTCTTTGGA TGTGGCAGGC GATTGCACAT GAGGCTAAGG CAATTAACAT ATATCACTGG
TACCCTATGA TGCTTGGTTT TGAGTCAGGT GGGTATGGGT TAATTAACCC TGATGGTTCA
TTAACCGATA GGGCTAGGAA GGCTGGGGAA ACAGCCAGGG TGATTTACGA GAATAGTGAC
CTATTCCTAA AGGCTAAGTT AATTGACTCA AGTGTGGCTA TACTTTATAA TATTGAGTCG
TATAAGTGGC TTTGGATTGC TCAAAGGCAT AGTAGTGATG TATTATCAAG GTCAATACTG
GGTGTTTATA GGGTTCTCTT CAATAGTAAT TATAATGTGG ATTTAGTATC CATTAGACAG
GTTGAAGGAA ACTTAATTAG TAAGTACAAG GTGCTTATAG CCCCATTATC ACTGGTAATG
ACCCTTAAGG CTGCCCTAGG TTTAAGGAAC TTTGTAAGTA ATGGTGGATT ACTACTGGTT
GATTCAAGGT TCGCAGCGAT TAGGAGTGAC GGTTACATTG ACTCAGGTAC ACCGGCGTAT
GGGTTAAGTG AGGTTATTGG GGGTTATGAG GACGGCTACA TGAGTGTGGA TAAGGTGAAC
TTAAGAATCA CTAGTAATCT AATACCTGGT TTAAAGACCG GTGACTTAAT AATTGGTTCT
AATTACGTTA GCTGGCTTAA TTCAAAGGCT AATGAAGTAG GGGTTAGTGA ATTTAACTTA
AGTAAACCTT CAATAACCAT TAATGATTAT GGTAAAGGGA AGGCAATCTA CGTGGGTACA
AGCATTGGTT TATCCTATGA GGCTAATGGA CCAGGGAGTG GTGTTGGAAA ATTAATAGAA
GGCATCATGA ATATTGCCAT GGTTCAACCA CCTGTTGAAG TTAAGTCAAC CAGGGAGGGT
TACATTGAGG TAAGAATAAT GAGGAGTGGT GCTGATTATT TACTCTTCAT AATAAATCAC
TCCTACGGTG ATCAACTAGT TAATGTGAGA ATTAATGAGA ATGTAATTAA TGTGGGCAAT
GCATCAATTA AGGACCTTGT AACTGGTGCA TCAATAAGTA TTACTAATAA TGAGCTTCAG
TTAACCCTAA GGGGTAGGCA AGTTGTAGTA GGGCTTGTGT CTATTTAA
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| Protein sequence | MSFPVSVWYG VGSVTPLFDE ETIKRDLKNI KEAGFKYVRG WVNWRDSEPR PGEYDFSGVE
NLLKTANDIG LRVILQVYLE FAPDWLPKLH PDSLYVSESG SVIMPQGSPG VCLDHPGVRA
RAEEFMRKLA QVVIKYPNFY VWDLWSEPNV IQWIYQPTGW RGLFCYCNYS KGRFRDWLKT
IYGNVNTLNK AWHRSYLEFN DVEPPRFVSL HFARDNIDWL TFNIVKLKED LEWRVKVIRS
IDNNHPVVSH SHGGTSVFSN PLFGEPDDWE MASVVDAWGT SFYPKHAGRV KVDHVLDSLV
LDAARSAALA SGKPYWIGEL QAGQGVGGLK AVEPVTPDDV ALWMWQAIAH EAKAINIYHW
YPMMLGFESG GYGLINPDGS LTDRARKAGE TARVIYENSD LFLKAKLIDS SVAILYNIES
YKWLWIAQRH SSDVLSRSIL GVYRVLFNSN YNVDLVSIRQ VEGNLISKYK VLIAPLSLVM
TLKAALGLRN FVSNGGLLLV DSRFAAIRSD GYIDSGTPAY GLSEVIGGYE DGYMSVDKVN
LRITSNLIPG LKTGDLIIGS NYVSWLNSKA NEVGVSEFNL SKPSITINDY GKGKAIYVGT
SIGLSYEANG PGSGVGKLIE GIMNIAMVQP PVEVKSTREG YIEVRIMRSG ADYLLFIINH
SYGDQLVNVR INENVINVGN ASIKDLVTGA SISITNNELQ LTLRGRQVVV GLVSI
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