Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1882 |
Symbol | |
ID | 6355223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2087776 |
End bp | 2088447 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642669482 |
Product | cyclase family protein |
Protein accession | YP_001943896 |
Protein GI | 189347367 |
COG category | [R] General function prediction only |
COG ID | [COG1878] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCTTTC TGTCGCACCA CTACGCTTCC GATACACCGA CTTATGGAGA TCGGGACAAG TTCAAGGTTG CAGCCAACTC TACCATTGCA GGAGGAGGTA CGGCTAATTC CTCCAGTTGG GTATTCACCA ACAACCATAT TGGGACCCAC ATCGATACAC CTTACCATTT TAACAGGAAC GGAATGCAGA CCCTGGACTA CCCGGCAGAT TTCTGGTATT TCAACCGAGT GGAGATCATA GATATCCCCT GCAATGCAGC CCGGATCATC GGTCCAGAAG CTGTTGCCGG CTGCATCATT GATCCGGGTA CCGAAATGCT GCTGATCAGG ACCGGTTATG AGTTGGTACG GCAGGAAGAT AAGTATTGGA ATGACAATCC CGGTCTGGCT CCGGAACTGG CAGATTATCT GCGCAGTAAT TTTTCGAAAA TGCGTGTTAT CGGTTTTGAT TTTATATCAA TCACTTCCTG GAAACACCGC CAGCTGGGTA GGGAAAGCCA TAAGGCTTTC TTGGTTCCGG GGCCGGGCAG GATACCCATA TTGGCCATTG AAGACATGGC TCTTCAGGCG GTTCATGAAT CAATCGAGTG GGCTCTTGTC TCTCCCCTTC GCACCGAAGA AGGAAACGGC TGTCCGGTTA CAGTTTTCGC CAAATTAACC TCCGATTCAT GA
|
Protein sequence | MIFLSHHYAS DTPTYGDRDK FKVAANSTIA GGGTANSSSW VFTNNHIGTH IDTPYHFNRN GMQTLDYPAD FWYFNRVEII DIPCNAARII GPEAVAGCII DPGTEMLLIR TGYELVRQED KYWNDNPGLA PELADYLRSN FSKMRVIGFD FISITSWKHR QLGRESHKAF LVPGPGRIPI LAIEDMALQA VHESIEWALV SPLRTEEGNG CPVTVFAKLT SDS
|
| |