Gene Clim_1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1882 
Symbol 
ID6355223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2087776 
End bp2088447 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content50% 
IMG OID642669482 
Productcyclase family protein 
Protein accessionYP_001943896 
Protein GI189347367 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTTTC TGTCGCACCA CTACGCTTCC GATACACCGA CTTATGGAGA TCGGGACAAG 
TTCAAGGTTG CAGCCAACTC TACCATTGCA GGAGGAGGTA CGGCTAATTC CTCCAGTTGG
GTATTCACCA ACAACCATAT TGGGACCCAC ATCGATACAC CTTACCATTT TAACAGGAAC
GGAATGCAGA CCCTGGACTA CCCGGCAGAT TTCTGGTATT TCAACCGAGT GGAGATCATA
GATATCCCCT GCAATGCAGC CCGGATCATC GGTCCAGAAG CTGTTGCCGG CTGCATCATT
GATCCGGGTA CCGAAATGCT GCTGATCAGG ACCGGTTATG AGTTGGTACG GCAGGAAGAT
AAGTATTGGA ATGACAATCC CGGTCTGGCT CCGGAACTGG CAGATTATCT GCGCAGTAAT
TTTTCGAAAA TGCGTGTTAT CGGTTTTGAT TTTATATCAA TCACTTCCTG GAAACACCGC
CAGCTGGGTA GGGAAAGCCA TAAGGCTTTC TTGGTTCCGG GGCCGGGCAG GATACCCATA
TTGGCCATTG AAGACATGGC TCTTCAGGCG GTTCATGAAT CAATCGAGTG GGCTCTTGTC
TCTCCCCTTC GCACCGAAGA AGGAAACGGC TGTCCGGTTA CAGTTTTCGC CAAATTAACC
TCCGATTCAT GA
 
Protein sequence
MIFLSHHYAS DTPTYGDRDK FKVAANSTIA GGGTANSSSW VFTNNHIGTH IDTPYHFNRN 
GMQTLDYPAD FWYFNRVEII DIPCNAARII GPEAVAGCII DPGTEMLLIR TGYELVRQED
KYWNDNPGLA PELADYLRSN FSKMRVIGFD FISITSWKHR QLGRESHKAF LVPGPGRIPI
LAIEDMALQA VHESIEWALV SPLRTEEGNG CPVTVFAKLT SDS