Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1742 |
Symbol | |
ID | 6354570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1914026 |
End bp | 1915852 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642669346 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001943762 |
Protein GI | 189347233 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGGAA TACGACAGAA ACTTGTGCTT GGCTTCGGAG GCCTGCTCCT TATCGTTGCC GGAATGGGAA TACTCACCAT CCGACAGATC GATACACTGG GAGAAGCCAT CGACGTCATT CTCAAACAGA ACTACCGGAG CGTTGTCGCC TGCCAGGAGA TGACCGAATC GCTTGAGCGT ATCGACAGCG GCGTCCTGTT CACCTTTGCC GGCCATTACG AGGACGGTAT CCGCAACATC AGGCAGCATG AACGGCATTT CGAAAAAGCA TTGCATACAG AACTCGACAA TATCACCCTG CCCGGCGAGC ACGAAAAGGC CATGCGTATC AGCAGCCTGT TCAGGAGGTA CTCCACCGTT ATCGACAAGG TAACCGATCC GCAGCGTCCT TTGCTGGAAA GGCAGCAATA CTATTTCTCG ACCCTCCTGC CGCTGTTCCG GGAAATCAAA CAACATGCGG GGTACATACT CGACATGAAC CAGGCAAACA TGAACGAGGC GAACGACAAC GCCAGAAAAA TGGCAGCTTC GGCGCACAAC ACCATGCTGG CTGCAATTGC TGCAAGTGCG CTGCTTGCAA TCCTCTTCAG TTTCCAGTCG AACCGGTGGA TTCTCATGCC GATCCGAAAA CTTATCGTTT CAGCCCAGGA GATCAGCAAA GGCAATCTCG ACCTCTCGCT CGATACCTCG TCGAACGACG AGATCGGGCA ACTTTCCCGC TCGTTCAACG AGATGGCGAC TACCTTGCGC AGGATACGTA AAGCGGACAG CCAGATCCTC CTGCGCACCA GAAAAACCCT GCAGGATGTC TTCAGAACCC TCCCCCTGCC CGTCGCAGTA TTCGATCCGG ACGGTCTTGT CGAGATCGCG ACCGAAAGTG CGGAACGCTA CTTCGGCATG AAGCCGGGCA GCAACGTTCA TGACCTTGGA TACCCCTGGA TGGAGGAATT GCTGGCCGGA ACGTTCCGGA AAGGATCAGG AGCGGACTCC GGAAAAAACA AAAGTTTTAT CCAGCATTTT GCCGATAACC GTGAGATATT CTTCCAGCCC ACCATCGTTC CGATTCCCTC CGGACACCCT GCAGAGGAGA GTTCCGGAAC GGCGCTGATA TTCCGGGATG TCACGCAGGT GCATGAACAG CTCGAACTGA AGCGCAGCGT CATTGCCACG GTTTCACACC AGCTGCGCAC ACCGCTGACC GCATTGAGAA TGTCCATCCA CCTCCTGCTC GAGGAGCATA CAGGACACCT CAACGGGCAA CAGGCTGACC TGCTGCTCGC CGCTCGGGAA GAGAGCGAGC GCCTTGTGCA TATCCTCGAC GACCTGCTCG ATATCAACCG GATCGAATCC GGCAAAGCTC ATCTTGACCT GTCTGCCCTT TCTCCCTGCC GTATCGGCGC TGAAGGCATG GAACCGTTCC TTCTGCCCTG CCGCGATCAG GGAGTAAGCA TAAGGAACAC CATTCCCGAA ACACTGCCGG ATATCGTGGC GGACAGGGAA AGCCTCATGC ACGTTTTTGC AAACCTGCTC TCCAACGCCC TCCGGTTCAC CTCTGCCGGA GGCTCAATAA CGCTCAATGC CTGCGAAGAT GACGGAAACA TCCGGTTCTC GATTGAAGAC ACCGGAACAG GCATCGACGC CGAACATATG GAACACCTTT TCGAGCCGTT CTACCGGGTT CCGGGACAGC GGGAGAAAAA CGGCATCGGT CTCGGACTCT CTATCGTCAA GGAGATCGTT GAGGCGCACG GAGGATCTGT CGACGCGGAA AGCACTCCGG GTAAAGGGTC GCGATTCTCT TTCAACCTGC CCATCCGGAA CACCTGA
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Protein sequence | MIGIRQKLVL GFGGLLLIVA GMGILTIRQI DTLGEAIDVI LKQNYRSVVA CQEMTESLER IDSGVLFTFA GHYEDGIRNI RQHERHFEKA LHTELDNITL PGEHEKAMRI SSLFRRYSTV IDKVTDPQRP LLERQQYYFS TLLPLFREIK QHAGYILDMN QANMNEANDN ARKMAASAHN TMLAAIAASA LLAILFSFQS NRWILMPIRK LIVSAQEISK GNLDLSLDTS SNDEIGQLSR SFNEMATTLR RIRKADSQIL LRTRKTLQDV FRTLPLPVAV FDPDGLVEIA TESAERYFGM KPGSNVHDLG YPWMEELLAG TFRKGSGADS GKNKSFIQHF ADNREIFFQP TIVPIPSGHP AEESSGTALI FRDVTQVHEQ LELKRSVIAT VSHQLRTPLT ALRMSIHLLL EEHTGHLNGQ QADLLLAARE ESERLVHILD DLLDINRIES GKAHLDLSAL SPCRIGAEGM EPFLLPCRDQ GVSIRNTIPE TLPDIVADRE SLMHVFANLL SNALRFTSAG GSITLNACED DGNIRFSIED TGTGIDAEHM EHLFEPFYRV PGQREKNGIG LGLSIVKEIV EAHGGSVDAE STPGKGSRFS FNLPIRNT
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