Gene Clim_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1742 
Symbol 
ID6354570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1914026 
End bp1915852 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content55% 
IMG OID642669346 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001943762 
Protein GI189347233 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGGAA TACGACAGAA ACTTGTGCTT GGCTTCGGAG GCCTGCTCCT TATCGTTGCC 
GGAATGGGAA TACTCACCAT CCGACAGATC GATACACTGG GAGAAGCCAT CGACGTCATT
CTCAAACAGA ACTACCGGAG CGTTGTCGCC TGCCAGGAGA TGACCGAATC GCTTGAGCGT
ATCGACAGCG GCGTCCTGTT CACCTTTGCC GGCCATTACG AGGACGGTAT CCGCAACATC
AGGCAGCATG AACGGCATTT CGAAAAAGCA TTGCATACAG AACTCGACAA TATCACCCTG
CCCGGCGAGC ACGAAAAGGC CATGCGTATC AGCAGCCTGT TCAGGAGGTA CTCCACCGTT
ATCGACAAGG TAACCGATCC GCAGCGTCCT TTGCTGGAAA GGCAGCAATA CTATTTCTCG
ACCCTCCTGC CGCTGTTCCG GGAAATCAAA CAACATGCGG GGTACATACT CGACATGAAC
CAGGCAAACA TGAACGAGGC GAACGACAAC GCCAGAAAAA TGGCAGCTTC GGCGCACAAC
ACCATGCTGG CTGCAATTGC TGCAAGTGCG CTGCTTGCAA TCCTCTTCAG TTTCCAGTCG
AACCGGTGGA TTCTCATGCC GATCCGAAAA CTTATCGTTT CAGCCCAGGA GATCAGCAAA
GGCAATCTCG ACCTCTCGCT CGATACCTCG TCGAACGACG AGATCGGGCA ACTTTCCCGC
TCGTTCAACG AGATGGCGAC TACCTTGCGC AGGATACGTA AAGCGGACAG CCAGATCCTC
CTGCGCACCA GAAAAACCCT GCAGGATGTC TTCAGAACCC TCCCCCTGCC CGTCGCAGTA
TTCGATCCGG ACGGTCTTGT CGAGATCGCG ACCGAAAGTG CGGAACGCTA CTTCGGCATG
AAGCCGGGCA GCAACGTTCA TGACCTTGGA TACCCCTGGA TGGAGGAATT GCTGGCCGGA
ACGTTCCGGA AAGGATCAGG AGCGGACTCC GGAAAAAACA AAAGTTTTAT CCAGCATTTT
GCCGATAACC GTGAGATATT CTTCCAGCCC ACCATCGTTC CGATTCCCTC CGGACACCCT
GCAGAGGAGA GTTCCGGAAC GGCGCTGATA TTCCGGGATG TCACGCAGGT GCATGAACAG
CTCGAACTGA AGCGCAGCGT CATTGCCACG GTTTCACACC AGCTGCGCAC ACCGCTGACC
GCATTGAGAA TGTCCATCCA CCTCCTGCTC GAGGAGCATA CAGGACACCT CAACGGGCAA
CAGGCTGACC TGCTGCTCGC CGCTCGGGAA GAGAGCGAGC GCCTTGTGCA TATCCTCGAC
GACCTGCTCG ATATCAACCG GATCGAATCC GGCAAAGCTC ATCTTGACCT GTCTGCCCTT
TCTCCCTGCC GTATCGGCGC TGAAGGCATG GAACCGTTCC TTCTGCCCTG CCGCGATCAG
GGAGTAAGCA TAAGGAACAC CATTCCCGAA ACACTGCCGG ATATCGTGGC GGACAGGGAA
AGCCTCATGC ACGTTTTTGC AAACCTGCTC TCCAACGCCC TCCGGTTCAC CTCTGCCGGA
GGCTCAATAA CGCTCAATGC CTGCGAAGAT GACGGAAACA TCCGGTTCTC GATTGAAGAC
ACCGGAACAG GCATCGACGC CGAACATATG GAACACCTTT TCGAGCCGTT CTACCGGGTT
CCGGGACAGC GGGAGAAAAA CGGCATCGGT CTCGGACTCT CTATCGTCAA GGAGATCGTT
GAGGCGCACG GAGGATCTGT CGACGCGGAA AGCACTCCGG GTAAAGGGTC GCGATTCTCT
TTCAACCTGC CCATCCGGAA CACCTGA
 
Protein sequence
MIGIRQKLVL GFGGLLLIVA GMGILTIRQI DTLGEAIDVI LKQNYRSVVA CQEMTESLER 
IDSGVLFTFA GHYEDGIRNI RQHERHFEKA LHTELDNITL PGEHEKAMRI SSLFRRYSTV
IDKVTDPQRP LLERQQYYFS TLLPLFREIK QHAGYILDMN QANMNEANDN ARKMAASAHN
TMLAAIAASA LLAILFSFQS NRWILMPIRK LIVSAQEISK GNLDLSLDTS SNDEIGQLSR
SFNEMATTLR RIRKADSQIL LRTRKTLQDV FRTLPLPVAV FDPDGLVEIA TESAERYFGM
KPGSNVHDLG YPWMEELLAG TFRKGSGADS GKNKSFIQHF ADNREIFFQP TIVPIPSGHP
AEESSGTALI FRDVTQVHEQ LELKRSVIAT VSHQLRTPLT ALRMSIHLLL EEHTGHLNGQ
QADLLLAARE ESERLVHILD DLLDINRIES GKAHLDLSAL SPCRIGAEGM EPFLLPCRDQ
GVSIRNTIPE TLPDIVADRE SLMHVFANLL SNALRFTSAG GSITLNACED DGNIRFSIED
TGTGIDAEHM EHLFEPFYRV PGQREKNGIG LGLSIVKEIV EAHGGSVDAE STPGKGSRFS
FNLPIRNT