| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1229 |
|---|
| Symbol | |
|---|
| ID | 6355330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 1325601 |
|---|
| End bp | 1327238 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642668845 |
|---|
| Product | ferredoxin-dependent glutamate synthase |
|---|
| Protein accession | YP_001943275 |
|---|
| Protein GI | 189346746 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0069] Glutamate synthase domain 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.610948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATA GCTTCCCGAC GAAAAAAGTT AAAGTCGCAA CATGGAGCGA GCTCGAAGAG
AAAAAACCGG CTTATGCGCA GGTATTGAAT GTTGACCTTG TCGTCATCCG CTACGGAGAA
AGCGTCTCGG TACTGTACGG TCGGTGCCAT CATCGCGGAG CCCTGATGGC CGACGGATCT
ATCGACGGAA AAAACCTTCT GTGCAGCGTG CACGGCTGGG ACTACCGGTT CGAGAGCGGC
ATAAGCGAAT ACAACAACGA CGAAAAGCTC GAACGCTTCG CGGCATGGAT CGACAAGGCA
GACAATGCCG TCTATGTGGA TGAAAACGAA GTCGCGAGCT GGTCAGCCCG GCATCCGCAG
CACGGTAGAG GCCATGCCTG GGCCGATACG AACGATACGC CGGAGGAGCC ATTCAATAGC
TATATCCGTC GGCTTGCCGC CACACAGCCA TCTGCATTTC CGGCCCATGG CAATGTTTCG
GCGATGGGAG TTCCGCTGAT CGATCTTCCG CAGTGGAAAG ATATCCAGAT CCTCACGGCG
CAACTCTCAA GACAGCCTTT TTTAGAAGAT GAACCGGTTG ATACCACAGT CGTTATCGGG
CCGAACGCGC GGATTCCCCT TACGCTGTCC ATACCGGTTT TCGTAACAGA CATGAGCTTC
GGAGCGTTGT CGCGCGAAGC TAAAATCGCG CTGGCAAAAG GCGCAGAGAT GGCCGGAACC
GGTATAGCTT CAGGCGAAGG CGGCATGCTG GAAGATGAGA GGAGAGAGAA CTCCCGATAT
TTCTATGAGC TTGCGCCCGC TAAATTCGGC TGGAATATCG ACAAAGTCAA GCGCTGCCAA
GCGTTTCATT TCAAGGCCGG TCAGGCTGCC AAAACCGGAA TCGGAGGAAT TCTGCCTGGT
GCGAAAGTGA GCCAGGAGAT CGCCGATACG CGCGGGCTTC GGCCTTATGA GGAAGCGGTT
TCGCCCTCCC GCTTTCCCGA TCTCTATACC CCGGAGGATT TCAGGGATTT ATCCGAAGAG
ATCCGCGAAG CGACCGGCGG CATCCCGATA GGGTTCAAAA TGTCTGCACA GCATATCGAA
CGGGATATCG ACTTCGCGCT TGATGCCGGT GCCGATTACA TCATTCTCGA CGGACGCGGC
GGAGGTACGG GAGCATCGCC CGATCTTTTG AAGTATCACA CCGGCATACC TACCATTCCG
GCTCTTGCGC GTGCCCGCGC ACATCTCGAC AGGTGCGGGG CTGCGAGCGT TTCGCTCGTC
ATCACCGGCG GCCTGCGCAC GGAAACGGAT TACCTCAAGG CCCTGGCTCT CGGGGCGGAT
GCCATCGCCA TCGGCAATGC CGCCATTCAG GCAATCGGCT GCCTCTCCAT GCGGGCATGT
GGCAACAACC ACTGCCCGGT GGGTATCGCG ACGCAGGATC CCGTTCTCAG GGAGCGGGTG
GTGACAGGGA TCGCTTCAGA AAGACTCCGT AATTACCTGT TGAACACCAC GGCCCTGATG
AAGGTCATGG CTCGCGCGTG CGGCTACCGG AGGCTCAGCG ATTTCAGCAG GCAAGATCTG
GTAACCTGCA GGGCGGATAT GGCCTCGCTT GCAGGCATAG CCCATGCCGG AGGATTTTCC
GATGCAGCGA AATCATGA
|
|---|
| Protein sequence | MNNSFPTKKV KVATWSELEE KKPAYAQVLN VDLVVIRYGE SVSVLYGRCH HRGALMADGS
IDGKNLLCSV HGWDYRFESG ISEYNNDEKL ERFAAWIDKA DNAVYVDENE VASWSARHPQ
HGRGHAWADT NDTPEEPFNS YIRRLAATQP SAFPAHGNVS AMGVPLIDLP QWKDIQILTA
QLSRQPFLED EPVDTTVVIG PNARIPLTLS IPVFVTDMSF GALSREAKIA LAKGAEMAGT
GIASGEGGML EDERRENSRY FYELAPAKFG WNIDKVKRCQ AFHFKAGQAA KTGIGGILPG
AKVSQEIADT RGLRPYEEAV SPSRFPDLYT PEDFRDLSEE IREATGGIPI GFKMSAQHIE
RDIDFALDAG ADYIILDGRG GGTGASPDLL KYHTGIPTIP ALARARAHLD RCGAASVSLV
ITGGLRTETD YLKALALGAD AIAIGNAAIQ AIGCLSMRAC GNNHCPVGIA TQDPVLRERV
VTGIASERLR NYLLNTTALM KVMARACGYR RLSDFSRQDL VTCRADMASL AGIAHAGGFS
DAAKS
|
|---|
| |