Gene Cla_1176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_1176 
Symbol 
ID7410340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp1127176 
End bp1127754 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content26% 
IMG OID643718302 
Producthypothetical protein 
Protein accessionYP_002575749 
Protein GI222824175 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG AAAATATCAT TTCTCAAATC AAAATACTTT CTACTTCAAT GTTTAAAAAA 
AATTTTTTTG GAATTTGTCA TGGATCAGTT TCAGCAAAAC TATCTCAAAG TTCTTTTATT
ATAAACAAAA ACGACACTTT TTTAAATCAA CTAGATGAAA AAAGTTTAAG TATTTTAAAA
TTTGCAAAAG ATTATAGCTG GGATGAAGCA AGCAGCGATA GTGAAATCCA TAAAAGTATA
TATGAAAATA TACCTGAAGC TAAATTTATA TGTTTTGCCT GCCCAACTTA TACCTTATCT
ATGAGTTTGA ACCATGATTT TATAACACCT CAAGATTATT TTGGTGAAAT TTTTCTAGAA
GAAATTCGAG TTTACAATCC TAAAAATTAT GAAGATTGGG AGGATAGATC ACAAACTGAA
ATTTATCGTT ATATGTTAGA ACAAAAACAA AATTTTGTTG TTGTAAAGGG TTATGGTATA
TTTGCCTATG GTAGAACAAG TTATGAATTA GGTAAGATTG TAGATTTAAT TGAAAATTCT
TGTAAAATTA TCCATTTAGC GGAGACAAAT TTATCATAA
 
Protein sequence
MNKENIISQI KILSTSMFKK NFFGICHGSV SAKLSQSSFI INKNDTFLNQ LDEKSLSILK 
FAKDYSWDEA SSDSEIHKSI YENIPEAKFI CFACPTYTLS MSLNHDFITP QDYFGEIFLE
EIRVYNPKNY EDWEDRSQTE IYRYMLEQKQ NFVVVKGYGI FAYGRTSYEL GKIVDLIENS
CKIIHLAETN LS