Gene Cla_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_1100 
Symbol 
ID7410834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp1054614 
End bp1055294 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content26% 
IMG OID643718226 
Productconserved hypothetical protein (DUF152 domain protein) 
Protein accessionYP_002575673 
Protein GI222824099 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAA ATAGACAAGA TTACATCACT TTATTAGAAA ATGACTTTGC AAAAGCTTTT 
GTAGTTTTTG ATAAAGATTA TAATATTTTT AGAGAAAAAA TTATTCCTCA TAGCGTGTTT
GACTTTGATA CTAATATACA AACTTGTGTT TTTTTAAATC AAATTCATTC TAATATAGTT
AGTGTTTATG ATGATAATTT TGATATAAAT TGCGATGGGA TTATTAGCGA TAAAAAAAAT
ACTGCTTTGT GTATTTTAAG TGCTGATTGC TTGCCTTTGC TTTTGTATGA TGATAAAAAT
AAAGCCATAG CAGCTTTGCA TTCTGGAAGA AAGGGTTGTT TTGAAAACAT CTTAAAAGAA
GCTGTTTTAA AAATGCAAAA AAACTTTAAC ACTCAAACCA AGAATTTAAA ACTTATTATT
TCAGCAGGAA TTTGTGCTAA AAATTATGAA ATTAATGGCG AGGTTTTAAA TTATAGCAAA
GAAAAATTTG CACCTTTTTT ACATGAAAAT AAGCTTGATT TAAAAGCATT AGTTAAATTT
CAAGCAAAAG AATTAGGTGT TAATGATATT TTTGATATCA ATCTTTGCAC TTTTGATGAT
GAGAGATTTT TTTCTTATAG AAAAAACCAA ACCACAAAAC GCATAGTAAG TGTAATTTAT
CTAAAGGATG AGCATGTATG A
 
Protein sequence
MATNRQDYIT LLENDFAKAF VVFDKDYNIF REKIIPHSVF DFDTNIQTCV FLNQIHSNIV 
SVYDDNFDIN CDGIISDKKN TALCILSADC LPLLLYDDKN KAIAALHSGR KGCFENILKE
AVLKMQKNFN TQTKNLKLII SAGICAKNYE INGEVLNYSK EKFAPFLHEN KLDLKALVKF
QAKELGVNDI FDINLCTFDD ERFFSYRKNQ TTKRIVSVIY LKDEHV