Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0115 |
Symbol | ispA |
ID | 7411347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 99121 |
End bp | 99969 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 643717251 |
Product | geranyltranstransferase |
Protein accession | YP_002574732 |
Protein GI | 222823159 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.0332253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCTTAG AAAAATTTAA ACAGCATTTA GAGCAAAATT TTCCTAGTAT TCAAAGCTTT CATCCTTTTT TTAATGAGGC TTTAAAATGG ATGTTAGAAG CTGGTGGGAA GCATTTTAGA GCCCAACTTC TTTTGGGTAT AGTGAATACT AAAAATCCTG CTTTGTTTGA AAAGGCTTTA AATGCGGCTT TGGCTTTGGA ATTTATCCAC ACCTACTCCT TGATACATGA TGATTTACCT GCTATGGATA ATGCTTCTTT ACGCAGAGGA AAGCAAACCT TACATAAAAA ATATGATGAA ACTACAGCTA TTTTAGTAGG TGATGCTTTA AATACTGAAG CTTTTTTACT ACTTTCAAAA CTTGATTTAA AAGAAAATAT TAGATTAAAA CTCATAGAAA CCTTAGCCTT TAATGCAGGG CTTGGCGGTA TGATCATTGG TCAGGCGATT GATTGTTATT TTGAAGATAT ACCTTTAAAT TTAGAGCAAG TTGAGTTTTT GCACATTCAT AAAACTGCAA GATTAATCGC AGCGGCTTTA AAAATGGGTT GTGAAATTTG TGAGTTAGAT GAAAAAGAAT GCGAGCAAAT TTATGATATA GGGCTTTTGA TAGGCTTAAT TTTTCAAATT AAAGATGATA TTATCGATGC GACTTTAGAT ACCCAAGAAG CAGGTAAGCC AACTCATAAT GATTTACATA AAAATTCTTT CATAAATCTT TTGGGTTTAG AAGGTGCTAA AAAGGCTAAA GATGATAAAA TAATTTTATG TGAAGAAAAA ATAAAAAATT TAGACTCTAA GCTTGCTAAT GAGCTTCAAA TTTTAATTGA TAAATATTTA AAAGGTTAA
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Protein sequence | MILEKFKQHL EQNFPSIQSF HPFFNEALKW MLEAGGKHFR AQLLLGIVNT KNPALFEKAL NAALALEFIH TYSLIHDDLP AMDNASLRRG KQTLHKKYDE TTAILVGDAL NTEAFLLLSK LDLKENIRLK LIETLAFNAG LGGMIIGQAI DCYFEDIPLN LEQVEFLHIH KTARLIAAAL KMGCEICELD EKECEQIYDI GLLIGLIFQI KDDIIDATLD TQEAGKPTHN DLHKNSFINL LGLEGAKKAK DDKIILCEEK IKNLDSKLAN ELQILIDKYL KG
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