Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_2752 |
Symbol | |
ID | 9146660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | - |
Start bp | 3059156 |
End bp | 3061018 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | PKD domain containing protein |
Protein accession | YP_003637837 |
Protein GI | 296130587 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.215191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000249109 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGTGGC ACCGTCCGTC CGGCCGGCAC CGGGCCTGGC GCCGGGTGCG CGCGGCCGTG GTCGGCCCCG GGCTCGTCGT CGCCCTGCTC GCCACGACCG CACCCGGTGC GACACCCGAC GCCTCTCCCT CCGCGCCCCC CGCCACGCCA CGCGCGGCGG AGGACCAGCC GCTCGTCGGT GCCTTCGTGC CGCGCGAGCC GTACGCGACG ACCGCGGAGG CAGCCGCGGC CTACGAGGAG GCGCTCGGCC GGCGGCTCGA CGTGCAGCGT GTCTTCCTGC GCTGGGACGA CCCGCTCGAC GCCCCCGCGG TGGCGGGCGC CGTGGCCCGC GGGCGCATCC CCCTGGTGTC GGTGCTGCCG CAGCACCTGG ACGGTCGTCG CCTCACGTGG GGGCAGATCG CGGCGGGCGA GGTGGACGAG CAGATCCGCA CGCACGCCGC GCAGGCCGCG GCGCTCGGAC CCGTGGTGTA CCTGACGCTG CACCACGAGG CCGACATCGC GTCCCCGTCG TACGGCACGG CCGCGCAGTT CGTCGCCGCG TGGCGCCACT GGGTGCAGGT GATGCGCTCG GAGGGCGTGA CGAACGCGCT GTGGACCTGG GTCACCTCGC CCGTGGCGGT GAGCCGCCCG CGCAGCGACC CCGGTGGGGG CGGCTTCTAC CCCGGTGACG ACGTCGTCGA CCGCATCGGG GCCGACGTGT ACAACTGGGC GGCCTGCCGC ACGAGCGTGC CGCCGGAGTG GCGGTCGCTG GCGACGGCCA CCCAGGGCCT GCGGGAGTTC GCCGCCGTGC ACGGCAAGCC GGCGGTGCTG CCCGAGTGGG GTTCGGTCGA GGACGCCGCG GACCCCGGGC GGCGCGCCCG CTGGCTGCGC GAGGCGTTCG CGTACCTGAG GTCGTGGCCC CAGCTCGAGG CCGCGGTGTA CTTCGACACC GTGGGGACGT GCGACTGGCG GCTCGCCCCG TCGCCCGCGG CGACCGCCGC GTTCCGCGAG GCCGCGCGGG ACGTGCGCGC GCGGCCGAGC GCGTGGCTGT CCGCGCCGCG CGCCGCGGTG CCCTCGACGT CCCCGGTGAC CTTCGACCTC GCCGCGAGCA CGGGTACGGG GGCGGCGCCG GGCACCGGCG TGGCCGCGTG GACCCTCGAC CACGGCGACG GGACGACGTC CGCGGGCGTC GGCCACCCTG CCGAGCCCGT CCGGCACGGG TACGCGCCCG GCACCTGGAC CGCGACCCTC ACCGTCACGG ACGCCACGGG GGCCACCGCC GTCGACCGTG CGACCGTGCG CGTCGCCGCG GCACCTCGCG TCGTCGGCAC GCTGGCGCAC GGCCTGACGT CGACATCCGT GGGCCTGCGG GCGTGGGTCG ACACCGGCGG ACCGGTCGGT GGCGCGCGCT TCGCATGGCG CAGCGAGGCG GGCACGGAGG GGGTGCACCT CGTGCCGCTC GTGGCGCGCC ACGGCACGCA GCAGGTCGAC GCCGCCGTCG AGGGTCTGCG GCCCGGGACG CGCTACACGT GGGACGTCAC GGCCGTCACC GAGGCGGAGA CCACCCGGGC GGGCTGGTTC CACACGCCCG GCCCGCCGAC GGTGCGTCCG CTGCCGGCGA CGAGCGTGAC GCGCACGGGG GCGCGCGTCG AGCTGCGCGT GCACCCCCAC GGCGTCGGGA CGGTCGCGTG GGTCGAGCAC GGGACCACGC TGCCGGGGGC CCGCACGGCC ACCCTCGACC TCGGCTCCGC CACGTACGAG CGTGCCGCGC AGGTGGCGCT GACGGACCTG GCCCCCGGCA CGGCGTACCG GTTCCGCGTG GTGGCGCACA GCTCCCTCGG GCAGGTGGAG GGCCCGGTGC AGACGTTCAC GACACGCCCC TGA
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Protein sequence | MSWHRPSGRH RAWRRVRAAV VGPGLVVALL ATTAPGATPD ASPSAPPATP RAAEDQPLVG AFVPREPYAT TAEAAAAYEE ALGRRLDVQR VFLRWDDPLD APAVAGAVAR GRIPLVSVLP QHLDGRRLTW GQIAAGEVDE QIRTHAAQAA ALGPVVYLTL HHEADIASPS YGTAAQFVAA WRHWVQVMRS EGVTNALWTW VTSPVAVSRP RSDPGGGGFY PGDDVVDRIG ADVYNWAACR TSVPPEWRSL ATATQGLREF AAVHGKPAVL PEWGSVEDAA DPGRRARWLR EAFAYLRSWP QLEAAVYFDT VGTCDWRLAP SPAATAAFRE AARDVRARPS AWLSAPRAAV PSTSPVTFDL AASTGTGAAP GTGVAAWTLD HGDGTTSAGV GHPAEPVRHG YAPGTWTATL TVTDATGATA VDRATVRVAA APRVVGTLAH GLTSTSVGLR AWVDTGGPVG GARFAWRSEA GTEGVHLVPL VARHGTQQVD AAVEGLRPGT RYTWDVTAVT EAETTRAGWF HTPGPPTVRP LPATSVTRTG ARVELRVHPH GVGTVAWVEH GTTLPGARTA TLDLGSATYE RAAQVALTDL APGTAYRFRV VAHSSLGQVE GPVQTFTTRP
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