Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_1058 |
Symbol | |
ID | 9144934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | + |
Start bp | 1174459 |
End bp | 1176435 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | transcription termination factor Rho |
Protein accession | YP_003636162 |
Protein GI | 296128912 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.534298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAGACA CCATCGACGC CGCCACGCCC GCCACGGGCG GACCGGGACC GGGCAGCATC GCCGCGATGC GCCTGCCGGA GCTCCAGGCG CTCGCCGCCC AGCTCGGCGT CAAGGGCACG AGCAAGATGC GCAAGAGCGA CCTGGTCCAG GCGATCTCCG CCGCGCGCAC CGGTGACCGG CCGCAGGCTC TGGAGACGCG CGCGACGACG CGCCGCGCCC GGGCCGCGGT CGCCGAGCGC GTCACGACGA GCGCGCCCGC GCAGGACCTC CCGGTGGCGT CCCCGGCACC GTCGGGGGAG CCCGGTGCTG CGGCGTCGGA GCGTCGGCCG GCCGGCCGCG ACGCGCTCGC CGGTCTGGAG GCGGCGCTCG ACGCGCGGCT CGCGCCGGCC GAGCAGCGGG ACGACCGCGC GGCCCGTGCG GCGGACGTCG TCGGCAACGT CGCAGGTGAA CGCCGCTCGC GCCGCGCCGG CCGCGGCGCG GGTGCCCCGG AAGCCGCGCC GGCCGAGGAG CCGGGCGAGC GCCCCCAGGG TGAGCGCCGG CAGAACGAGC GCCGCCACAA CGGTGAGCGC CCCCAGGGCG AGCGTCGCAC CGCGGAGCAG GACGCCGACG CGCCCGCGCA GGGCGTCCCG GCCGGTGCGG GCGACAAGCC GGAGGACGAG GAGCGCGGCG GCCGCCGGCG TCGCTCGCGG GACCGCTTCC GCGACCGGGA CCGGGACCGC AAGAGGGGCC GGTCCCGCAC GGGCCAGGGC GACCTCGCCG GCCTCGACGA GGTCGAGGTC ACCGACGACG ACGTGCTGCT GCCCGTGGCG GGCATCCTCG ACGTCCTCGA GTCCTACGCG TTCGTGCGCA CCACCGGCTA CCTGCCGGGG CCCAACGACG TCTACGTCTC GCTCAACCAG GTCAAGAAGC ACGGCCTGCG CCGGGGCGAC GCGATCACCG GCGCCGTCCG CCAGCCCCGC GAGGGTGAGC AGCAGCCCAG CGGGGGCCGG CCCAACAAGT TCAACGCGCT CGTGCGGCTC GACACGGTCA ACGGCCTGCT GCCGGACGAG GCCCGCGAGC GTCCCGAGTT CACCAAGCTC ACGCCGCTGT ACCCGCAGGA GCGGCTGCGT CTGGAGACCG AGCCGGGCCG GCTGACGCCG CGCGTCATCG ACATCGTCGC GCCCATCGGC AAGGGCCAGC GCGGCCTCAT CGTCGCGCCT CCCAAGGCCG GCAAGACGAT CATCATGCAG CAGATCGCCA ACGCGATCAC GCACAACAAC CCCGAGGTCC ACCTCATGGT CGTGCTCGTC GACGAGCGCC CCGAGGAGGT CACGGACATG GAGCGGACGG TCAAGGGCGA GGTCATCGCC TCGACCTTCG ACCGCCCCGC GTCGGACCAC ACGATCGTCG CGGAGCTCGC GATCGAGCGC GCCAAGCGCC TGGTCGAGCT CGGTCAGGAC GTGGTCGTGC TGCTGGACTC GCTGACCCGG CTGTCGCGCG CCTACAACCT GGCCGCGCCC GCGTCGGGCC GCATCCTGTC CGGGGGTGTC GACGCCTCGG CGCTCTACCC GCCGAAGCGG TTCTTCGGTG CGGCGCGCAA CATCGAGAAC GGCGGCTCGC TGACGATCCT CGCCTCCGCG CTGGTGGAGA CGGGCTCGAA GATGGACGAG GTCATCTTCG AGGAGTTCAA GGGCACCGGG AACATGGAGC TGCGCCTGTC GCGCCAGCTC GCGGACAAGC GCATCTTCCC GGCGGTGGAC GTCAACGCGT CCGGTACCCG CCGCGAGGAG GTGCTCATGA GCAACGACGA GCTGAAGATC ATCTACAAGC TGCGCCGCGT GCTCGGCGGG CTGGACCAGC AGCAGGCCAT CGAGCTGCTG CTCGGCAAGC TCCGCGAGAC GAAGTCCAAC GTGGAGTTCC TGCTCCAGGT GCAGAAGACG ACGCCGGGCA ACAACGGTCC CGCGCTCGAG GAGGGCGTCG GCCGCACGGT CGTCTGA
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Protein sequence | MTDTIDAATP ATGGPGPGSI AAMRLPELQA LAAQLGVKGT SKMRKSDLVQ AISAARTGDR PQALETRATT RRARAAVAER VTTSAPAQDL PVASPAPSGE PGAAASERRP AGRDALAGLE AALDARLAPA EQRDDRAARA ADVVGNVAGE RRSRRAGRGA GAPEAAPAEE PGERPQGERR QNERRHNGER PQGERRTAEQ DADAPAQGVP AGAGDKPEDE ERGGRRRRSR DRFRDRDRDR KRGRSRTGQG DLAGLDEVEV TDDDVLLPVA GILDVLESYA FVRTTGYLPG PNDVYVSLNQ VKKHGLRRGD AITGAVRQPR EGEQQPSGGR PNKFNALVRL DTVNGLLPDE ARERPEFTKL TPLYPQERLR LETEPGRLTP RVIDIVAPIG KGQRGLIVAP PKAGKTIIMQ QIANAITHNN PEVHLMVVLV DERPEEVTDM ERTVKGEVIA STFDRPASDH TIVAELAIER AKRLVELGQD VVVLLDSLTR LSRAYNLAAP ASGRILSGGV DASALYPPKR FFGAARNIEN GGSLTILASA LVETGSKMDE VIFEEFKGTG NMELRLSRQL ADKRIFPAVD VNASGTRREE VLMSNDELKI IYKLRRVLGG LDQQQAIELL LGKLRETKSN VEFLLQVQKT TPGNNGPALE EGVGRTVV
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