Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_01920 |
Symbol | |
ID | 8374400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | + |
Start bp | 234984 |
End bp | 236333 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644993115 |
Product | arabinose efflux permease family protein |
Protein accession | YP_003150605 |
Protein GI | 256826646 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 105 |
Fosmid unclonability p-value | 0.535895 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGGCT CAACCGTTTC TGCCGGCAGC ATCGATGCGA TTTCTGAAGA AGAAAAGCGC CGCACGCTGA ACCGCGTAGC GTTTTCTTCC TTTCTCGGAA ATTTTATCGA GTGGTTTGAT TATGCAAGTT ATTCCTATCT TGCAACGGTT CTTGCCGTTG TGTTCTTTCC TGGGGAAGAC AAGGTAGTTG CCACGATGAG CACATTCGCC GTATTTGCGC TTGCATTTCT TGTTCGTCCT GTTGGCGCCA TATTTTGGGG CAATATGGGA GATAAAAAAG GGCGTAAATG GGCACTGTCT ATTTCTATCT TGTTGATGAG TGGTGCGACC TTTCTTATTG GTTGTTTGCC GGGTTATGCG GTGCTGGGGG TAGGTGCTCC CATTTTGCTG CTGCTTTTGC GCATGGTGCA GAGCTTTTCT GCATCGGGGG AATATGCAGG CGCTTCAACC TTTATTGCGG AATATGCTCC CAAACAGCGG CGCGGTTTTT TCTGCTCATT CGTACCTGCT TCAACAGCAA CCGGTCTGCT GATCGGCTCC CTTGCTGCAA CGCTCATGTT TAGCGTATGG GGAGCAAGTT CCGACTTTGT CGTGAATTGG GGTTGGCGCA TTCCCTTCCT AGTTGCGCTA CCACTTGGCT ACATCACCCA TTACATCCGC GTTCATCTGG AGGATTCACC TATCTATGCC CAGATGCAGG ACGCAATTGA TCAAAAGAGT GCCGAAGCAG AAGATCATCC TATTCGCGCA CTGTTCACGA AGCATGGGCG GAAAACCATT ATTTCGTTTG GCGCTTGCGT GCTTAATGCG GTGGGGTTCT ATGCCGTGTT GACCTATCTG CCGAACTACC TTGAAGTAAC ACTCAACTAC GATTCTGCGG CAGCCTCTAC TATTACCACC ATCGTGCTGG TGCTCTACAT TGCCTTTATT TTCACGGCTG GGCGTATATC CGACAAGGTA GGACGCAAGC GGATGCTTAT AACTGCCTGC GTTGGCTTTA TCATCTTTAC CATTCCTGCG TTCCATTTGC TTGCGAGCCA GGACTTCATT GTTATTTTGT TGGTCGAGCT GTCCATGTGC ATGTTGCTTA CCATTAACGA TGGATCGCTT GCGAGTTATC TAACCGAGAC ATTTCCAACT GAAGTGCGTT ATTCGGGATT TGCGTTTAGC TTCAATTTGG CAAATGCTAT TTTTGGCGGG TCAGCTTCCT ACATCGGCTT TGCGCTTATC AACGCAACAG GCGATCCGGT TGCGCCGGCA TACTATTTGG TTGCGATTGC TGCAATAGCG CTGGTGGCAA TGTTGTTGTC CCACGAGCAC GCTGGTAAAG ATTTATCGCA TGTGAAATAA
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Protein sequence | MDGSTVSAGS IDAISEEEKR RTLNRVAFSS FLGNFIEWFD YASYSYLATV LAVVFFPGED KVVATMSTFA VFALAFLVRP VGAIFWGNMG DKKGRKWALS ISILLMSGAT FLIGCLPGYA VLGVGAPILL LLLRMVQSFS ASGEYAGAST FIAEYAPKQR RGFFCSFVPA STATGLLIGS LAATLMFSVW GASSDFVVNW GWRIPFLVAL PLGYITHYIR VHLEDSPIYA QMQDAIDQKS AEAEDHPIRA LFTKHGRKTI ISFGACVLNA VGFYAVLTYL PNYLEVTLNY DSAAASTITT IVLVLYIAFI FTAGRISDKV GRKRMLITAC VGFIIFTIPA FHLLASQDFI VILLVELSMC MLLTINDGSL ASYLTETFPT EVRYSGFAFS FNLANAIFGG SASYIGFALI NATGDPVAPA YYLVAIAAIA LVAMLLSHEH AGKDLSHVK
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