Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2848 |
Symbol | |
ID | 7311467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 3400415 |
End bp | 3401776 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643609743 |
Product | SNF2-related protein |
Protein accession | YP_002507122 |
Protein GI | 220930213 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0134701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATACA ATCCTCATAA ATATCAGACC TATGCAACGA ATTTCATTCT AGAGCATCCC ATAGCCGCGG TGTTTTTAGA AATGGGTCTT GGCAAAAGCG TCATTACTCT AACGGCTATA TTTGATTTAT GTCTTGATAG TTTTGAAATT GGAAAGGTTC TGGTCATTGC CCCGCTTCGA GTAGCAAGGG ATACTTGGCC AGCTGAGATA AATAAGTGGG AGCATTTAAA AGGACTGGAG TTTTCGGTAG CTATCGGCAC AGAACAGGAG CGATTGGCGG CTCTAAGGAA ACCTGCAAGT GTCTATCTTA TAAACAGAGA AAATGTTGAC TGGTTAGTAA ATAAAAGTGG TATACCTTTT GATTATGACA TGGTGGTCAT TGATGAGCTT TCATCTTTTA AGTCCTATGG AGCAAAAAGG TTTAAAAGTT TACTAAAAGT AAGACCGAGG GCAAAACGGA TTGTAGGTCT TACGGGTACA CCTTCCAGTA ATGGATTAAT GGATTTGTGG GCAGAGTTTC GTATTCTCGA CATGGGTAAA AGACTCGGCA GGTACATAAC TCACTACCGC AATTCCTTCT TTACACCAGA TAAACGCAAT CAGCAAATCG TATTTTCATA TAAACCATTG CCAGGTGCTG AAGATGCCAT ATATCGGCTC ATTTCAGATA TTACCATTTC CATGAAGTCG ATAGATTTTC TAAAAATGCC TGAATGCGTG ATCAATGAAG TGCCTGTCTA TCTTAATGCT AAAGAACAAT CCGTATATGA TCACTTTCGT GAAGAGATGG TCCTTGAATT TGGCGATGAA GAAATAGATG CCATGAATGC AGCTGTCCTT TCAGGCAAAC TTCTGCAAAT GGCAAACGGT GCTATCTATG ATGATGATAA AAAACCCCAT ATTATCCACG ACCGCAAGCT AGATGCTCTA GAGGATTTAA TTGAAGGTGC TAACGGCAAA CCCGTGCTTA TTGCCTATTG GTATAATCAC GATTTGGAGC GTATTAAGGC AAAATTTAAT GTCAGAGAAA TTAAAACTTC CAAGGATATT AAGGATTGGA ACAACGGTGA TATTTCTGTG GCAGTTATCC ATCCTGCATC GGCGGGACAC GGTCTCAACT TACAAAGTGG AGGTTCAACG CTTATCTGGT TCGGACTTAC TTGGAGTCTG GAACTCTATC AACAAACAAA TGCGAGACTT TGGAGACAAG GACAAAAAGA GACAGTAGTA ATCCATCACA TCATTACTAA AGGCACAATC GATGAAGATG TGATGGGAGC CTTGAAACGA AAGGAAAAGA CACAAACCGA TCTTATTAAT GCGGTCAAAG CAAATCTTGG GAAAGCGAGG GATACCGTAT GA
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Protein sequence | MKYNPHKYQT YATNFILEHP IAAVFLEMGL GKSVITLTAI FDLCLDSFEI GKVLVIAPLR VARDTWPAEI NKWEHLKGLE FSVAIGTEQE RLAALRKPAS VYLINRENVD WLVNKSGIPF DYDMVVIDEL SSFKSYGAKR FKSLLKVRPR AKRIVGLTGT PSSNGLMDLW AEFRILDMGK RLGRYITHYR NSFFTPDKRN QQIVFSYKPL PGAEDAIYRL ISDITISMKS IDFLKMPECV INEVPVYLNA KEQSVYDHFR EEMVLEFGDE EIDAMNAAVL SGKLLQMANG AIYDDDKKPH IIHDRKLDAL EDLIEGANGK PVLIAYWYNH DLERIKAKFN VREIKTSKDI KDWNNGDISV AVIHPASAGH GLNLQSGGST LIWFGLTWSL ELYQQTNARL WRQGQKETVV IHHIITKGTI DEDVMGALKR KEKTQTDLIN AVKANLGKAR DTV
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