Gene Ccel_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1942 
Symbol 
ID7310657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2294339 
End bp2295781 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content37% 
IMG OID643608876 
Productcopper amine oxidase domain protein 
Protein accessionYP_002506270 
Protein GI220929361 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA CACTACTATT TGTTATGATT GCTGTAATGG CACTAACCTT ATTTCCGGCT 
GTTACCGGTA TTTCATCGGC CGCTGCTGAC TCAGAATCAC CCGTAACAGT TGAAACCGCA
AAAATAGAAA AAACTGATGA TAGCTGTTCT ATAAAAATAA TATATCCTGT TTTAAGTGGC
TTTTCATCGG CTGATAAAAT CAATGACACG CTTCATAATA AAAATCTTGA TTTAATAGGA
TTTATCAGAA GGGAACAGGC ATATCTGGAC GATTACAGAA AAGAGTTGCC AGCGGAAGAA
AAATATTTTC CTCAGGTAGC CATAGATTCT TCATTTGATT ACAATACAAG CGGTAACATT
CTATCTCTGG TTACAAATAC ATATGAATAT CTCGGCGGTG CACACGGTAT GACTACTCTG
CAAGCTTATA CCGTTAATAC AAAAACAGGC GAATTGTATT CGTTTAACTC TCTATTTAAC
CAAAAGTCAA ACTATAAGAA AGTCATTCTT GATAAAATAA AAGCATCAAT AGATAAAGAA
AAAGAATGGT ACTTTGATGA AGCAAAGACT TTCGTAGATG AAGCAAAAGG CAATTACAAA
TTTTATATTG ACGGAAACAG ACTGGTAATA TACTTTGGGG TATATGAATT AAGACCGTAT
GCAGGAGGAA TATCCAGATT CAGCATACCT GCAAAAGAGC TTAAAGGACT GCTTAAGGAT
GACATCTATA ACCAGATGGT GAATGCAAAA CCTCTTGAGA AAATAAGGCT GAATGGAACA
AGTGTGAAAA CCCAGTTTAA AACCTACGAA AAAGACTATG TATTAATGGT ACCTCTTAAA
ACAGCTGCTG AAATCCTCGG TTACAAGGTA GGCTGGAATT CAAAAAAGGG AGCAAGCGTA
GCAGGAGGGT ATATTAAAAA TAATGTAGAC ACATATTACA CAACAGGTTC AAGAAAAATA
AAGTTGACTC CTGCAAAAAT AATAGGAAAT GTGATGTATG TACCAGTTGC ATACTTTTCA
GAAGTTTTGA AAGAGGATGT AAGTTATGAC GGGGAAGGAA TACGGTTATT TACAAAGTCA
ACCGTAACCC CAAGTCAGTT CGACCTACAG AGTACTGAGT TTGTGAGAGC TGACAGTGCA
AAAGCATGTG CGGATATGTA TACAAAAGCT GTAAAGGAAC GTAAAGGTGT AATTCAGTAT
GGATTAATGT CACCACAATT AAGGACAGCC AAAAAGGCAG GTTTTGAAGA AATGAACTGG
GTAACTGGAG TGTCCAGCCC ATGGGTTACA TCATATAATA TTAAAGATAA TGGCAATGGT
ACTTTTAAAA TAACCTTCCA TTGGGCGACA TCTACCGGAA AGTCGCCTGA CACTATAGCA
ACACTTACCG TCAGCAAAGT GAAAGATCAG GAGTATTATG AGATTTCAGC TATTAAGGAG
TAA
 
Protein sequence
MKKTLLFVMI AVMALTLFPA VTGISSAAAD SESPVTVETA KIEKTDDSCS IKIIYPVLSG 
FSSADKINDT LHNKNLDLIG FIRREQAYLD DYRKELPAEE KYFPQVAIDS SFDYNTSGNI
LSLVTNTYEY LGGAHGMTTL QAYTVNTKTG ELYSFNSLFN QKSNYKKVIL DKIKASIDKE
KEWYFDEAKT FVDEAKGNYK FYIDGNRLVI YFGVYELRPY AGGISRFSIP AKELKGLLKD
DIYNQMVNAK PLEKIRLNGT SVKTQFKTYE KDYVLMVPLK TAAEILGYKV GWNSKKGASV
AGGYIKNNVD TYYTTGSRKI KLTPAKIIGN VMYVPVAYFS EVLKEDVSYD GEGIRLFTKS
TVTPSQFDLQ STEFVRADSA KACADMYTKA VKERKGVIQY GLMSPQLRTA KKAGFEEMNW
VTGVSSPWVT SYNIKDNGNG TFKITFHWAT STGKSPDTIA TLTVSKVKDQ EYYEISAIKE