| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1128 |
|---|
| Symbol | |
|---|
| ID | 7312188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1385865 |
|---|
| End bp | 1387064 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643608051 |
|---|
| Product | Saccharopine dehydrogenase |
|---|
| Protein accession | YP_002505466 |
|---|
| Protein GI | 220928557 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.785881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAGG CTTTGATAAT TGGTGCAGGC GGTGTAGCAA ATGTTGTTAT CCATAAATGC
TGTCAGAACC CCGATGTATT TGAAGAAATA TGTATAGCTA GCCGGACTTT GGATAAATGT
GAGGCTATAA AAAATAAATT GACAGGAAGC AAAACTGTAA TTCAAACGGC CCAGGTGGAT
GCTGATAATA CTGATATGCT AATCAACCTT ATCAATAAAT TCAGGCCAGA TATTGTTATA
AATGTAGCAC TTCCATATCA GGATTTGACC ATTATGGATG CTTGTCTTGC AACAGGTGTA
CATTACCTTG ATACTGCAAA TTATGAGCCG CCTGAGATAC CAAAGTTTGA ATATAAATGG
CAATGGGCAT ATAGAGACAA ATTTGAAAAG GCAGGAATAA CCGCTCTTCT GGGAAGCGGT
TTTGATCCGG GCGTGACAAG TGTTTTCTGT GCGTACGCTC AGAAGCATTA CTTTGATGAG
ATACATTATA TAGATATTGT AGATGCAAAT GCAGGAGATC ACGGATATCC GTTCGCTACA
AACTTTAATC CTGAAATAAA TATACGTGAA ATAACTGCAA AAGGAAGCTA CTGGGAAAAA
GGAAATTGGG TTGAAACAGA ACCCCTTGAA TTAAAAAGGG TTTACAATCT TCCTGAAATA
GGACCAAAGG ATATTTATTT GCTTCATCAC GAGGAAATTG AGTCTTTGGC CCTGAACATC
AAAGGTGTAA AAAGAATTAG ATTCTGGATG ACTTTTTCTG AGAAATATCT TACACACTTG
AGGGTACTTG AAAATGTAGG TATGACATCT ATTGAGCCCA TTGATTTCGA AGGCAAGAAA
ATTATTCCTT TACAGTTCCT GAAGGCTGTG CTTCCTGATC CTGCTTCACT TGGCCCAAGA
ACCAAAGGGA AAACAAATAT CGGCTGTATT ATACAGGGTG TAAAGGACGG AAAGCCAAGA
ACATATTATG TGTATAATGT ATGTGTACAT GAAGAGTGTT ACGCAGAAGT AGGTTCGCAG
GCAATTTCCT ATACAACAGG AGTTCCGGCG ATGATCGGAG CAATGATGAT ACTAAAAGGA
ATCTGGAAGG GACCGGGTGT TTTCAACATT GAAGAATTTG ATCCGGATCC TTTTATGGAA
GAGTTAAACA GATGTGGGCT TCCTTGGAAG GAAAGCTTCG CACCAGGGCT TATTGACTAA
|
|---|
| Protein sequence | MGKALIIGAG GVANVVIHKC CQNPDVFEEI CIASRTLDKC EAIKNKLTGS KTVIQTAQVD
ADNTDMLINL INKFRPDIVI NVALPYQDLT IMDACLATGV HYLDTANYEP PEIPKFEYKW
QWAYRDKFEK AGITALLGSG FDPGVTSVFC AYAQKHYFDE IHYIDIVDAN AGDHGYPFAT
NFNPEINIRE ITAKGSYWEK GNWVETEPLE LKRVYNLPEI GPKDIYLLHH EEIESLALNI
KGVKRIRFWM TFSEKYLTHL RVLENVGMTS IEPIDFEGKK IIPLQFLKAV LPDPASLGPR
TKGKTNIGCI IQGVKDGKPR TYYVYNVCVH EECYAEVGSQ AISYTTGVPA MIGAMMILKG
IWKGPGVFNI EEFDPDPFME ELNRCGLPWK ESFAPGLID
|
|---|
| |