| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1000 |
|---|
| Symbol | |
|---|
| ID | 7309828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1242260 |
|---|
| End bp | 1243099 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643607927 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002505342 |
|---|
| Protein GI | 220928433 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACGTTA CGAATAAAAA TAAACTTTAC AAAATATTAG TAAATACAGC TATGGTATTT
ATTGGGTTGA CTTTTCTCTT CCCCTTGTAC TGGATGATAA ATCTGTCGTT TAAGTCAAGA
AGCGAAGTGT ATGACAATCC ATTTGGGCTT CCTGAACAAT GGGTTTTTGA CAACTATAGC
GGAGCACTTG AAAAATTTAA TTTTCCGAGG TATCTATCCA ACAGTTTGAT ATATTCTGTA
AGTACAATCG TTATAACAAT ATTTTTGGGA AGTATGCTCG CATACTGCCT GAGCAGAATG
AACTGGAAGT TTAAAGGATT TGCTTTGAGC TACATTTCAA TGGGTCTGAT TGTACCCGCC
CAGGTGGTAA TTATACCATT GCTTATGATG ACACGAAGTA TGGGTTTAAA AGGTACACAC
CTTGGCTTGA TACTTCCTTA TTCGGCCTTT GCTCTCTCTT CATGTGTTCT TATGCTTTAC
GCCTTTTTCA GAGGCCTGCC GAAAGAACTG GAAGAAGCGG CCTGTATTGA TGGATGCAAT
ATCTATCAAA CTTACTTCAG AATTATTCTG CCTGTTATAA AACCGGCAAT TGCCACTCAA
TGTGTTCTGA TATTTATTAA TATATATAAC GAATTCTTTC TAGCTTTTAT TTTAGCGGCT
GATGACAAGA TTCGGCCTTT AACGGTTGGT TTGCTTAACT TCTTTGTAAG CATAGGAGTG
TCCCATTGGG GACAAATCGG GGCTGCCATG ATTATTACAA GCCTGCCAAT GATAATAGTA
TATATGTTTG GAAATGAGCA AATAGAGAAC GCTCTTACAG CAGGTGCAAT TTTGAAATAA
|
|---|
| Protein sequence | MDVTNKNKLY KILVNTAMVF IGLTFLFPLY WMINLSFKSR SEVYDNPFGL PEQWVFDNYS
GALEKFNFPR YLSNSLIYSV STIVITIFLG SMLAYCLSRM NWKFKGFALS YISMGLIVPA
QVVIIPLLMM TRSMGLKGTH LGLILPYSAF ALSSCVLMLY AFFRGLPKEL EEAACIDGCN
IYQTYFRIIL PVIKPAIATQ CVLIFINIYN EFFLAFILAA DDKIRPLTVG LLNFFVSIGV
SHWGQIGAAM IITSLPMIIV YMFGNEQIEN ALTAGAILK
|
|---|
| |