Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0558 |
Symbol | |
ID | 7309428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 642360 |
End bp | 644855 |
Gene Length | 2496 bp |
Protein Length | 831 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643607494 |
Product | protein of unknown function DUF214 |
Protein accession | YP_002504920 |
Protein GI | 220928011 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTTTC CTACCGATAA TAGGCTTGTG ATAAAAAAGA TAACTGTAAG AACTATAAAA GCAAATAAGG TTAGGAATAT ATTTGTTATT ACTGCAATAG CGTTAACTGC TTTTCTGCTG TCAACCATCT TTAGTATAGG AATAAGTGGG ACAGAGTCTA TCCAATTACA GAAAATAAGA ACTATGGGAA CTATAGAGCA TGGAGGTTTA ACTTTTCCCA CGGATGAACA GATAAAAAAG CTGAAATCAT TGGATTATAT TGAAGATGTA GGCATAATGG CACATGCCGG AGATATAATA GAAACTCCTG ACATGGGAAA TTTGTCTCTG TCATTATTCT GGTTTGATAA AACAGAATGG GAAAAACTCA GAGTTCCTGC CATGAACAAT ATTAAAGGGA AATATCCTCA GGAATATAAT GAGATAATGG TATCGGATTG GATTCTTAAA AGGATAGGAA TAACTAATCC TAAAATAGGA ATGGATATAC CAATTAAATA CGGAAAGGTC GGCGGTACTG ATTCTGAAGC TACAAATGAA AACTTTAAAC TCTCGGCATA TTACACAGAA TACTCTAATC TACGTTCGGG AAATGCGGGA ATGCTGTATG TCTCAAAAGC TTTTCTTGAT AAGAACGGAG TAACTCCTGA GAATTCAGGT ACTGCAACAA TACGCTTCAA AAGCCAAAAA AATATTGGAG AACAATTTGA AAAACTTAGC AGGGAGGTCA CTGCATCCCC AAATCAGAAG TGGAAAATGG TGCCATTGTA TGAAACAGTT AATGGAGACA GACTATCAAC GATAATAGGC CTGTCAGCAC TTATACTGTT CATAATGCTC AGCAGCTATC TGCTAATATA TAATGTTCTA TATATTTCAG TATCAAAGGA TGTACGCTTT TACGGCTTAT TAAAAACAGT AGGTACTACC CCAAAACAGA TAAGAGCAAT AGTAACGGGT CAGGCAATGA GGCTGACTGC CTTGGGAATC CCTCTGGGAC TTGCTTTGGG AGCAGCAGTT TCTTTTGTTG CCGTACCATT TGCACTAAGC GGAGCGACAA TAGATACAGG TATAAAAATA TCCTTCAATC CTATCATATA TGTTGGTGCG GCCGTTTTTT CTCTTGTAAC CACACTTATC AGCAGTATAA AACCTGCCGG AATGGCTGCC ACGATTTCAC CGATAGAGGC TGTCAGATAC ACCGGAACAG ATGTATCCCG TAAACTTAGA AAAGTGTCAA AGGTCGGCAA GGTACAAAAA ATGGCTTTTA GAAATGTTTT TCGAAACAGA AGAAGGGCAG CAGTTGTATT TTTATCACTG TTCATGGGGA TAACGACCTT TATACTAGTA AATACACTTG TGCTTAGCAT GGATACGGAA AATTACGTAA ACAGCTATAT TGATAATGAT TTTACTCTAA CTAATAATAC ATTTTTTCAA AATGGTACAG GAATTAAGCA GAAATTTGAT AATGATTTTA TGTCAACTTT TAAAAGAATA GAAGGAATAA CAGAAATAAG AAAGGTATCA CAAAAGATAG TTACTCTCAA ATACGATGAC AATCTCTACA AGGAACATCT TGAAGAATTC GGAAAAAGAC ATAATACACA AATGCCCACA GGTGACGAAA TAGAGAAAAA TCCAAGGTTT TTCTGGTCAA ATCTGGTGGG ACTTGACATG GAATATATAA AGAAACTTAA CAAAACACTT GGAGAACCTA TTGATGTGGA AGCTTTTGAA GCGGGCCGGA TAGCTTTATT TTCAACAAAT AATCCAAAGC ATTTCAAGGT GGGATCAGAT ATTGTTTTTA CAGCTGATGA AAAAGAATAT TCCCTCAAGC TGGGAGGATT TTTGCCTGAA AGAACTGCAT TTAATGGAGG TATGGGGCCG GCACCCCTTG TTTACATAAG CAATGACTAC ATGAAAAAGC TATTTAATAA CCCTGTATTC TGTTCTGTAA CAATGAATGC CGAAGTGGAC AAAGAGGCAC ATGTATTAAA ACAGTTAAAG GAATTGACGG CAAATGATAA TGAAATATCA CTTGATTCAA GGCTGGAAAC TCTGGAGCAA TTTAGAAGTT CAAAAACAAT GTTATATATT CTCGGCGGTG GAATGTCCTT GATATTGGCA CTTATAGGTA TTCTCAATTT TGTAAACGTA ATGGTAACGG GAGTAAACAC AAGACGACAT GAGTTTGCTG TTTTAGAGAG TATTGGCATG ACTCCGAGAC AGCTAAAACG TATGTTGTCC CTGGAGGGAC TCATTTATGC CATTATTTCC TGCGGACTTG TGGCTACTTT GGGAGCTGCA CTAAATATAT GGGTATTCAG CTTATTCAAG AAGCAGGCTG ATTACGCAAT TTTTACATTC CCTACAATCC CGTTGGTTTT ATCTGTAGTT ATCGTTTTTG CAGTGTGTAT TTTAGTACCA GTAGCTGCAT ATGTTACAAC AACAAAAGAT ACAGTTACGG AGAGGTTGAG AAGCGTTGAA GGTTAG
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Protein sequence | MMFPTDNRLV IKKITVRTIK ANKVRNIFVI TAIALTAFLL STIFSIGISG TESIQLQKIR TMGTIEHGGL TFPTDEQIKK LKSLDYIEDV GIMAHAGDII ETPDMGNLSL SLFWFDKTEW EKLRVPAMNN IKGKYPQEYN EIMVSDWILK RIGITNPKIG MDIPIKYGKV GGTDSEATNE NFKLSAYYTE YSNLRSGNAG MLYVSKAFLD KNGVTPENSG TATIRFKSQK NIGEQFEKLS REVTASPNQK WKMVPLYETV NGDRLSTIIG LSALILFIML SSYLLIYNVL YISVSKDVRF YGLLKTVGTT PKQIRAIVTG QAMRLTALGI PLGLALGAAV SFVAVPFALS GATIDTGIKI SFNPIIYVGA AVFSLVTTLI SSIKPAGMAA TISPIEAVRY TGTDVSRKLR KVSKVGKVQK MAFRNVFRNR RRAAVVFLSL FMGITTFILV NTLVLSMDTE NYVNSYIDND FTLTNNTFFQ NGTGIKQKFD NDFMSTFKRI EGITEIRKVS QKIVTLKYDD NLYKEHLEEF GKRHNTQMPT GDEIEKNPRF FWSNLVGLDM EYIKKLNKTL GEPIDVEAFE AGRIALFSTN NPKHFKVGSD IVFTADEKEY SLKLGGFLPE RTAFNGGMGP APLVYISNDY MKKLFNNPVF CSVTMNAEVD KEAHVLKQLK ELTANDNEIS LDSRLETLEQ FRSSKTMLYI LGGGMSLILA LIGILNFVNV MVTGVNTRRH EFAVLESIGM TPRQLKRMLS LEGLIYAIIS CGLVATLGAA LNIWVFSLFK KQADYAIFTF PTIPLVLSVV IVFAVCILVP VAAYVTTTKD TVTERLRSVE G
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