Gene Ccel_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0197 
Symbol 
ID7309101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp220495 
End bp221310 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content40% 
IMG OID643607126 
Productprotein of unknown function DUF1113 
Protein accessionYP_002504564 
Protein GI220927655 
COG category[S] Function unknown 
COG ID[COG4905] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTTT TTTATGAATT CATTATCTTT CTCACCATTT ACAGCTTTAT AGGATGGGTC 
TGCGAGGTCA TATACTGCTC TATATTATCA AGGAAAATAG TAAACAGAGG CTTTCTAGCA
GGCCCTGTTT GCCCGGTATA TGGCTTTGGT GCAATGTTTG TAGTCTTTTT ATTGAAACCT
GCGGACTCCG GCATAATTGT AATTTTTCTG ACAGGGCTTG CACTTACCAG TATACTTGAG
TACATAACAG GCTGGCTGCT GGAGGCTTTT TTCAGTACAA AATGGTGGGA CTATTCAAAT
AACAGGTTTA ATCTGAACGG CAGGGTATGT TTAAAAAACT CGGTTTTATT CGGAATAATG
TGCGTTGTTC TGGTAAAGGT ACTGCATCCT GCAATAACTC ATGTTGTAGC ACTTATTCCT
GAAATATGGG TAAGGGTATC GGGGATAGTA CTTATTGCAG CGTTTGCCAT CGATATACTA
CTTACTGTTA ATACCCTGTT GAATCTTCAT GATCGGCTTA AAAAGCTGCA CGAGTTTACA
GAAGACTTAA AAAAGAATGG AGAAATACTG GAATGGTTTA ATGAACGGGA GCTGTTTAAA
AGTTTTGAAA AACTCCGGCT TTTAGCTGAG GAAAGCAAAA ATGAGCTTAA CCTCAGATTG
AGAGAGAAGT TTGAGACTCT TAGCCAGAAA AGAGGCAGCG GTCAGCGTTT GATTAAGGCA
TTCCCAAATA TGAAAAGCAT AAAGTACCAG GTTCAGCTTG ATCATCTAAA ATATATCCTC
AAGCAACTAA GGGAAAGGGC CGGCGGAAAG CATTGA
 
Protein sequence
MDVFYEFIIF LTIYSFIGWV CEVIYCSILS RKIVNRGFLA GPVCPVYGFG AMFVVFLLKP 
ADSGIIVIFL TGLALTSILE YITGWLLEAF FSTKWWDYSN NRFNLNGRVC LKNSVLFGIM
CVVLVKVLHP AITHVVALIP EIWVRVSGIV LIAAFAIDIL LTVNTLLNLH DRLKKLHEFT
EDLKKNGEIL EWFNERELFK SFEKLRLLAE ESKNELNLRL REKFETLSQK RGSGQRLIKA
FPNMKSIKYQ VQLDHLKYIL KQLRERAGGK H