Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_5424 |
Symbol | |
ID | 5897196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010333 |
Strand | - |
Start bp | 136633 |
End bp | 137229 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641550712 |
Product | major facilitator family transporter |
Protein accession | YP_001672198 |
Protein GI | 167621690 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.18135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCCC CCATGAAGAA GGGTGGCGCG GTGACGGCCT TGATTTCTCT GACCGCGATC AATTTCGTTT GCCTGTACGA CCGCGTGCAG ATTTCCGGGC TCGCCCAGCC CATCAAGGAG GAGTTCGGTC TCTCCGACAC CCAACTGGGC TTATTGTCCG GCACGGCCTT CGGACTCACC TACGCGACCA TGGCCATTCC CCTCGGCTGG CTGTCGGACC GCACCAACCG CATCAAACTC CTCTCGGCTG CCTTGGCGCT TTGGAGCCTG ATGACCGCCT TCGCCGCCGT CACCCAGAAT TTCGCCCAGC TGGCGCTGTC CCGGATCGGT GTCGCCGTCG GGGAATCGTC GTTCACCCCG ACCGCACACT CCCTGCTGGC GGATTATTTT CCGCCTCATC GCCGAGGGTT CGCGATCGGG ATCGAAACGG CCGGCGCCAT GGCGGGGATC ATGACGGGGC TGGCAGTCTC AGGATGGCTC GCGGCGGCCT TCGGCTGGCG TCGGCATAGG TGGCCTCGTC CACAACGCTC ACCGCCTCGA ACTCAGGGGC GAGTCCCTGC GCCGCTCCGC CATCCTAGTG GATTGATGCC GACATAA
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Protein sequence | MKAPMKKGGA VTALISLTAI NFVCLYDRVQ ISGLAQPIKE EFGLSDTQLG LLSGTAFGLT YATMAIPLGW LSDRTNRIKL LSAALALWSL MTAFAAVTQN FAQLALSRIG VAVGESSFTP TAHSLLADYF PPHRRGFAIG IETAGAMAGI MTGLAVSGWL AAAFGWRRHR WPRPQRSPPR TQGRVPAPLR HPSGLMPT
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