Gene Caul_5424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5424 
Symbol 
ID5897196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010333 
Strand
Start bp136633 
End bp137229 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content64% 
IMG OID641550712 
Productmajor facilitator family transporter 
Protein accessionYP_001672198 
Protein GI167621690 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.18135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCCC CCATGAAGAA GGGTGGCGCG GTGACGGCCT TGATTTCTCT GACCGCGATC 
AATTTCGTTT GCCTGTACGA CCGCGTGCAG ATTTCCGGGC TCGCCCAGCC CATCAAGGAG
GAGTTCGGTC TCTCCGACAC CCAACTGGGC TTATTGTCCG GCACGGCCTT CGGACTCACC
TACGCGACCA TGGCCATTCC CCTCGGCTGG CTGTCGGACC GCACCAACCG CATCAAACTC
CTCTCGGCTG CCTTGGCGCT TTGGAGCCTG ATGACCGCCT TCGCCGCCGT CACCCAGAAT
TTCGCCCAGC TGGCGCTGTC CCGGATCGGT GTCGCCGTCG GGGAATCGTC GTTCACCCCG
ACCGCACACT CCCTGCTGGC GGATTATTTT CCGCCTCATC GCCGAGGGTT CGCGATCGGG
ATCGAAACGG CCGGCGCCAT GGCGGGGATC ATGACGGGGC TGGCAGTCTC AGGATGGCTC
GCGGCGGCCT TCGGCTGGCG TCGGCATAGG TGGCCTCGTC CACAACGCTC ACCGCCTCGA
ACTCAGGGGC GAGTCCCTGC GCCGCTCCGC CATCCTAGTG GATTGATGCC GACATAA
 
Protein sequence
MKAPMKKGGA VTALISLTAI NFVCLYDRVQ ISGLAQPIKE EFGLSDTQLG LLSGTAFGLT 
YATMAIPLGW LSDRTNRIKL LSAALALWSL MTAFAAVTQN FAQLALSRIG VAVGESSFTP
TAHSLLADYF PPHRRGFAIG IETAGAMAGI MTGLAVSGWL AAAFGWRRHR WPRPQRSPPR
TQGRVPAPLR HPSGLMPT