Gene Caul_5346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5346 
Symbol 
ID5897086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010333 
Strand
Start bp56253 
End bp57014 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content67% 
IMG OID641550638 
ProductDNA repair protein RadC 
Protein accessionYP_001672124 
Protein GI167621616 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.67199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGAC CCACTCATCG CAACGACGCC ACACCTTGCC AGACCGCCGA TCTGTTCGCC 
GCGGCGGGCG TGGGCGAGAT GACCGCTCGC TACGCCGGCC CTTCGTCTCC AGCCCCCTCA
AACGGGACGC TGGGCGCGAG GGCCGCGACC GGCGGCCTGG CGAGCCTGAG CGACATCGAG
GCGCTCGAAC TCCTGCTCTC TCGGTCCCTG GCCAACGGCG CCCGGGCCAC GGCCGTAGCA
CTTCTGGCCC GGTTCGGTTG TCTTCGGCGG GTGCTGACGG CCGACCTTGC CGCACTTTCG
ACGTTCGTCG ACACCCGTGT CGGCATCGAC CTGCAGCTGA TCTACGACGC CGCGCGTCGG
CTTGCGGCGG CCGAATTGCC AGGGCGTTGC GTCGTCTCCT CGTGGACGGC GCTCATCGAC
TACCTGAAGC TCACCATGGC CCACTGTGAA CGCGAGGCGT TCCGCGTGCT GTTCCTCGAC
AAGAAGAACC AGCTGATCGC CGATGAGATT CTCAATCACG GCACCGTCGA CCACGCGCCC
GTCTATCCGC GCGAAGTCGT GCGGCGGGCG CTGGAGGTGT CCGCGTCGGC TGTGATTTTG
GTTCACAATC ACCCATCGGG CGATCAGACT CCCTCGTCGG CCGACATCGA GATGACCAAG
AAGGTCGTCG ACGCCGCCCG GACCCTGGGT ATCGCGGTGC ATGACCACGT CATTGTCGGG
CGCGCCGAGG TCGCCAGCTT CAAGGCGCTG GGATTGATCT AG
 
Protein sequence
MPRPTHRNDA TPCQTADLFA AAGVGEMTAR YAGPSSPAPS NGTLGARAAT GGLASLSDIE 
ALELLLSRSL ANGARATAVA LLARFGCLRR VLTADLAALS TFVDTRVGID LQLIYDAARR
LAAAELPGRC VVSSWTALID YLKLTMAHCE REAFRVLFLD KKNQLIADEI LNHGTVDHAP
VYPREVVRRA LEVSASAVIL VHNHPSGDQT PSSADIEMTK KVVDAARTLG IAVHDHVIVG
RAEVASFKAL GLI