Gene Caul_3408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3408 
Symbol 
ID5900863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3680835 
End bp3681701 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content67% 
IMG OID641563914 
ProductBeta-lactamase 
Protein accessionYP_001685033 
Protein GI167647370 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.126776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0176052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGCG CGGCCTCGAT CCTCCTGGCG CTGCTGGCCC TGGCTCAGGC CGGCGCGGCG 
CGCGCCGCCG ATCCGGCCAA CTGGTCCAAG CCGATCCGCC CGTACCGGGT GGTCGGCAAC
ATCTACTATG TCGGCTCCGA GGGCTTGTCG GCGTGGTTGA TCTCGTCGTC GGAAGGCCAT
GTCTTGCTCG ACAGTGGGCC TGCGCCCGCG GGCGCAAAGC TGATCGAGGC CAACATCACC
GCCCTGGGCT TCAAGCTCTC GGACGTGAAG ATCCTGATCA ACACCCACGC CCATTTCGAC
CATGCCGGCG GGCTGGCCCA GCTGAAGGCC GACACCGGGG CCAAGGTCTG GGCCTCGCGC
CCCGACGAGC CGGCCCTGGA GAAGGGCCAG CATTTCGGCG ACAACGCCAA CGGCCTGACG
CCCTTCGCCG CGGTCAAGGT CGACAAGGCC TTCGGCGACG GCCAGAAGCT GAAGCTGGGC
GAGACGACCC TGATCGCCCA CCTGACGCCG GGCCACACGA TCGGCTGCAC CAGTTGGACC
ACCCAGGTGA TCGATCGCGG CCGGCCGCTG AACGTCACCT TCCCCTGTTC GGCCTCGGTG
GCCGACAATG TTTTGGTCGG CAACAGCGCC TACAAGACCA TCGTCGCCGA CTACCGCGCC
ACCTTCGCGA CGCTGAAGGC TCTGCCGACC GACGTGATGC TGCCCGCCCA CGAAGAGCAG
GGCCATCTGT TGGACAAGCG CAAGAAGATG CTCGCCGGCG ACGTCAACGC CTTTATCGAT
CCCACCGAAC TCGCCCGCTA CGCGGCGACC TCGGAGCAGG CCTTCGACAA GGAATTGGCC
CGCCAGCAAG GCGCGCGCAA ACCCTAG
 
Protein sequence
MKRAASILLA LLALAQAGAA RAADPANWSK PIRPYRVVGN IYYVGSEGLS AWLISSSEGH 
VLLDSGPAPA GAKLIEANIT ALGFKLSDVK ILINTHAHFD HAGGLAQLKA DTGAKVWASR
PDEPALEKGQ HFGDNANGLT PFAAVKVDKA FGDGQKLKLG ETTLIAHLTP GHTIGCTSWT
TQVIDRGRPL NVTFPCSASV ADNVLVGNSA YKTIVADYRA TFATLKALPT DVMLPAHEEQ
GHLLDKRKKM LAGDVNAFID PTELARYAAT SEQAFDKELA RQQGARKP