Gene Caul_3282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3282 
Symbol 
ID5900737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3550817 
End bp3551401 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content66% 
IMG OID641563788 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001684907 
Protein GI167647244 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.431761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAGG GACGCGCGCG CGTCGTAGCC TGGCTGGGGC GGGAGATCCT CCCCCATGAG 
GCGGATCTGC GCGCCTGGCT GCGGCGCTCG TTCGCCGCCG CCGGGGACGT CGACGACATC
ATTCAGGAGA CCTACTGCCG TTTGGCCGCC CTGACTCACA TCGACCATAT CGATCAGCCG
CGATCCTATC TCTTCCAGGC CGCCCGCAAC GTCGCGCTCG AGCAAATCCG GCGGGCGCGC
GTGGTGCGGA TCGAAACTGT CGCCGAGATT GAATCGCTCA ATCTGGAGCA CGACACCCCG
TCGGTCGAAC GCGTGATCTC GGGGCGGCGG GAGCTCGAAA GGGTGCGATC GCTGATCGCC
GGTTTGCCCG AGCGATGCCG GCGCATCTTC GAGATGCGCA AGATCGAGGG TGTCTCCCAG
CGGGAAATCG CTCGGAGACT GGGCGTGAGC GAACACATCG TCGAGAACGA GTCCGTGAGG
GGCCTGCGGG CCATCCTCGC GGCGATGACC GAACAGGACC GCCCCTTCGT CGGGGCCAAG
GGATTGAAAG AGAAGACCGA TGGTCGAACG CGAAAGCGCC GCTGA
 
Protein sequence
MSEGRARVVA WLGREILPHE ADLRAWLRRS FAAAGDVDDI IQETYCRLAA LTHIDHIDQP 
RSYLFQAARN VALEQIRRAR VVRIETVAEI ESLNLEHDTP SVERVISGRR ELERVRSLIA
GLPERCRRIF EMRKIEGVSQ REIARRLGVS EHIVENESVR GLRAILAAMT EQDRPFVGAK
GLKEKTDGRT RKRR