Gene Caul_2124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2124 
Symbol 
ID5899579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2290341 
End bp2290829 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content69% 
IMG OID641562613 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001683750 
Protein GI167646087 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.334185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.110092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGC TGCGCGCTGA ACTGGTGTTG TTTCTCCAGC GACGGGGGCA ATCGCTGGAG 
GACGCCGAGG ACATCGTCCA GGAGGCCTTC GCTCGCTTCC ATCGCGCCGG CCACCTGATC
GGTCAGGCTG ACAGCCGGCC GCTGCTGTTC GCCATCGCCA AGAACCTTCT GAAGGACCAC
TGGAAGCAGG CCGGCCGCGA GCGCGCCCGC ACCCTCTGGC TCGACACCGA CGACACGACC
GCGGCCTGGG AGAATGCCCC AAGCGAGGAT CCCGCCGCCG ACCGCCGCTC GATCGCCCGC
CAGGATCTGG CCGGCGTCGC CGCCGCCATC CGCCAGCTGC CGCCGCGCTG CCGCGACGCC
TTCCTGCTGC ATCGCTTCGA GGACCTCAGC TATCGTCAGA TCGCCGATCG CCTCGGCGTG
TCGGTCAGTA TGGTGGAAAA ACACCTGGCC GAAGCGCTAC GACGGCTGAA AGCCGCGCGG
GGGACGTGA
 
Protein sequence
MTGLRAELVL FLQRRGQSLE DAEDIVQEAF ARFHRAGHLI GQADSRPLLF AIAKNLLKDH 
WKQAGRERAR TLWLDTDDTT AAWENAPSED PAADRRSIAR QDLAGVAAAI RQLPPRCRDA
FLLHRFEDLS YRQIADRLGV SVSMVEKHLA EALRRLKAAR GT