| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_1926 |
|---|
| Symbol | |
|---|
| ID | 5899381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 2066549 |
|---|
| End bp | 2067223 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641562416 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001683553 |
|---|
| Protein GI | 167645890 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.857726 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCA GCGCCCGAAC GGCTCGTCGG GAAACTTCGG CCAAGCCGTC GGACGTCGGT
ACGAACGACC TTGCTTCCAC GACCGCGGTT CGCCCGCGGC GACCGGATCC ACGGGCGGCC
AAGACCATCG AGAACATCAT CAACGCCGCG CAGAACGTGA TGATGAATCA CGGTACGCCG
CGCATCACAG CCCAGGAGGT CTGCGACGAG GCCGGCGTCT CGCGCGGGAC CCTGTATCGA
TATTTCCCGT CGATGGAGGC GGTCCTGGAA GCCGTGCTCC TGCGGCTGAG GACCGAGACC
GACAGCGAGC TGAACCACGC GATGGCGGGG TGCGACACCC CGGCGGAACG GTTCGCGGCC
TTCCTGAAAT ACAGCGTCTC CAACAATGAG ACCCGGCGGG GATCCCAGTT CCTTCATGTC
GAGCCGGCAT TCGTGCTGCA GTACTTCGAA TCCAACTTCG AGCACTTCAT CGCGCGCGTG
TTGACGGCGT TGGAAACCGT GTTCGACGCC TGGGAGAAGG AGATCGGCGC GGCGGTGGAT
CGCAGCGCCA TCGCCGAGAT GATGGTGCGC CTGGCGCTCA GCGAAACCGT GGTCTTCCCC
CGCGAAGGCC AGCCCCTGGC GCTTCGACTG CAGCAGACGG TCGACAAGAT TCTCGGCGCC
TTGAAACGCG GCTAG
|
|---|
| Protein sequence | MTVSARTARR ETSAKPSDVG TNDLASTTAV RPRRPDPRAA KTIENIINAA QNVMMNHGTP
RITAQEVCDE AGVSRGTLYR YFPSMEAVLE AVLLRLRTET DSELNHAMAG CDTPAERFAA
FLKYSVSNNE TRRGSQFLHV EPAFVLQYFE SNFEHFIARV LTALETVFDA WEKEIGAAVD
RSAIAEMMVR LALSETVVFP REGQPLALRL QQTVDKILGA LKRG
|
|---|
| |