Gene Caul_1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1528 
Symbol 
ID5898983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1619065 
End bp1619805 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content67% 
IMG OID641562015 
Productpolysaccharide export protein 
Protein accessionYP_001683156 
Protein GI167645493 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.726212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGGC GCACCCTTCT CTTGGCGGCT TTCACCCTGC CTTTCGCGGT CGGCGGTCTG 
GCCGCCTGCG GCCACGTGGA TCGCGAGCCG ATCACCCCCA CGGCCCGTCC GACGGCCACT
TTCTCCGATA TCGGCTATGC CGACTGGTCG GACCAGGAGC CGGACTACCG GTTTTATCCG
GGCGACGAGG TGGAGGTGAG CGTGCCTTCG GCGAGCGAGC TGAACAAGTC CGTGGTGGTC
CAGCCGGACG GCCGCGTCGC TTTGCCGCTG ATCGCCCCGG TGATGGCCGC CGACCGCACG
ATCGGCGAAC TGGAGGCCTC GATCACCCAG GCCTATTCGA GCCAACTGCT GCGACCGCAG
GCGCAGGTGT CGATCAAGGC GACGGCGCCG CTGAAGGTGT TCGTGGGCGG GGAAGTGGGC
AATCCGGGCG CCTATGACAT GGCCGGCGAC ACCGATGCGC TGCGGGCGAT CATCCAGGCG
GGCGGGTTCA AGACCTCGGC CAAGCGCACC TCGGTGGTGA TCATTCGCCG CGGCCCCAAC
GGTCGGGCCA TGCTACGCAC GGCGGACCTG TTGTCGGGGA TGACCAACGG GCGAACGGAC
CTGGTGCCGC TTCGCCGGTT CGACGTGGTC TATGTGCCGC GCAGCGGGGT GTCCGAGGCG
GGCCTGTTCA TGCAGCAGTA CTTCCGCGAT CTGCTGCCGA TCAGCTTCAG CTACGCGATC
AACGGCTTCA GCGGAAACTG A
 
Protein sequence
MHRRTLLLAA FTLPFAVGGL AACGHVDREP ITPTARPTAT FSDIGYADWS DQEPDYRFYP 
GDEVEVSVPS ASELNKSVVV QPDGRVALPL IAPVMAADRT IGELEASITQ AYSSQLLRPQ
AQVSIKATAP LKVFVGGEVG NPGAYDMAGD TDALRAIIQA GGFKTSAKRT SVVIIRRGPN
GRAMLRTADL LSGMTNGRTD LVPLRRFDVV YVPRSGVSEA GLFMQQYFRD LLPISFSYAI
NGFSGN