Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_1340 |
Symbol | |
ID | 5898795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 1422573 |
End bp | 1424132 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641561827 |
Product | putative transcriptional regulator |
Protein accession | YP_001682968 |
Protein GI | 167645305 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGC GAAGTATCAC GGACGACGAA ATCGCTCTGA TCAAGGCGAT GAAAAAACGT GGCATGGCCA ACAAGGACAT CCAGTTCTTT TTCAATCGCC CGGGGAGGGC GGTAAATTCA GGTCGAATTT CGGATATCGG AAAGGGTACC TACAGCGATT GCGCGACCAT TCAGGCTGCC TCCGATCTCG AACTGGATGG GTTCCTGTCG TCGTTCGATT CGGCAGGGGT GAGCGCCCAG ATCCAAGTTC CGGCGGCCTC TTCGATAGAA GCCCCGGAGA CGGGGCCGGT CGATCCGAGG GCGATCAATC GGCTGTTTGC GAAGGGGCCT GATGGGGTCT GGCGGCTCGC GCATGGCGAG GCAGACGACC TTGAGTGCAA GGCCAACTTT GGTTTCAAGC ACTCGCACAA TTGGATCAGG GCGATTGCTG CGCTGGCCAA CAATCGAGGC GGCTACGTGC TGTTCGGTGT CGCCGACAAA GGGACCATCG GTCCTGCTGG CGAAGATCAT AGCCATGCTG TCGTGGGGCT GGGCTCGAAG GACTTCGAGA ACGCCGACCC CGCTGACATC ACCAATAAGC TGCGTTCCTG CCTGGACCCG ACCCCGCGCA TTCAGATCCG TACCCATGTG CTGGCAGGGA TCACGATTGG CGTCATCCAC GTCGAACAGC ATCCGAGCCG GCCCGTCATC GTCACGAAAA CCGAAGGCGA CAAGATCAAG GAAGGCGATA TTTTCTTCCG CTATCCGGGG CAGTCCATCC GCATAAAATA TAGCGATCTG CGAGCCATCC TTGATGGGCG TGATGCGGCG GCACGTCGCG AAATCATGCC GGCCGTCGAG CGTCTGCTGA CGCTTGGCCC GAGGCGAGCG CTCATCGCGG ATTTGGATGA GGGCACGCTT GGCAGCGGTG GAAACCTCAT CACGATCGAC CCCGAGTTGG TGAAGCAGAT TCAGTTCGTG AGGGAAGGGG ACTTCAAGCA GGCGGATGGC GCTGCCGCCC TTCGGCTTGT CGGTGATGTG GTCACCGCGA CCACGACGGG TAAAATCGAG AGCCGTGGGG TTGTGACCGA CAAAATCCTG CTTCGGAATT TCCTAGCTCG GGAAACCATC GCGAGCCCGA CGGAGTACGT GCGATTCGCT ACCGAGGGCG CTCACGCGGC CTGGCTGCCG ATTTTCTATT TCGCGAACGC GGCAAAGCTG GACCGAGCCG CGTTGGAGGC GTTTGTCGGG AAGCTGGATG GCGCGAAGGC AAAAAAGGAT AGGCTGCTGA GGCGCATCAA AGGGGATGTC AGTGCATACG AACGATACAC GGGTACGCCC GCCACTATCC TCAAGAAGCT TATGGCAGGC GACGACGTGA CGCCGACAGA CGCCAAGGGA GCGATCAACG CCGCCATGGC TGTGTGCGGT CTGAAGGATG GTCACGGGCT TGCGGCCGAC CAACTCCTTA GCCTTCTAAC AAGCTGCCTC GCCTTGGTGG AGGCTACGCC GACAGCGCAT GGGCTAAGTC ATGTGCGGCG TGCCGCTTGT CGCCTTGATG AGCTATTTTA TCCGCTGTGA
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Protein sequence | MAKRSITDDE IALIKAMKKR GMANKDIQFF FNRPGRAVNS GRISDIGKGT YSDCATIQAA SDLELDGFLS SFDSAGVSAQ IQVPAASSIE APETGPVDPR AINRLFAKGP DGVWRLAHGE ADDLECKANF GFKHSHNWIR AIAALANNRG GYVLFGVADK GTIGPAGEDH SHAVVGLGSK DFENADPADI TNKLRSCLDP TPRIQIRTHV LAGITIGVIH VEQHPSRPVI VTKTEGDKIK EGDIFFRYPG QSIRIKYSDL RAILDGRDAA ARREIMPAVE RLLTLGPRRA LIADLDEGTL GSGGNLITID PELVKQIQFV REGDFKQADG AAALRLVGDV VTATTTGKIE SRGVVTDKIL LRNFLARETI ASPTEYVRFA TEGAHAAWLP IFYFANAAKL DRAALEAFVG KLDGAKAKKD RLLRRIKGDV SAYERYTGTP ATILKKLMAG DDVTPTDAKG AINAAMAVCG LKDGHGLAAD QLLSLLTSCL ALVEATPTAH GLSHVRRAAC RLDELFYPL
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