Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_1281 |
Symbol | |
ID | 5898736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 1345811 |
End bp | 1346971 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641561766 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001682909 |
Protein GI | 167645246 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0104305 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCGTGC ATCAACGGAT CAATAGACGC GGCCTGCGTT CGACTGCGTT ACCGGTGGTG CTTTGCATCG GCGCTCTGAG CCTGGCCGCC TGCGACCACA ACGACAAGGC CAAGGCCAAG GCGACGAAGC CTTCGCAGGC CGCCAGCCAG ACCGTCGGAG TGGCCGTGGT CACCGTCCAG GCCCTGCCCC GGATCATCAA CGCCTCCGGC ACCGTCACCC CCTGGGAGGA AGTTCCCGTC GGCGCCGAGA CCGGCGGCCT GACCGCCGTG TCGGTCAACG CCGAGGAAGG CCAGACCGTG CGCCAGGGCC AAGTCCTGGT GGCGATGAAC GACACCATGC TGCGCGCCCA GGCGCGTCAG CAGGAGGCCT CCGTGGCCAG CGCCCGCGCC ACCCTGGCCG AGGCGCAGTC CGCCCTGGCC CGCTCGCGCG AACTGCAGGC CAAGGGTTAT CTGGCCGCCT CGGCGCTCGA CACCGCGAAC ATGCGCCAGC AGACCGCCAG CGCCCAGGTG GCCGCGGCCG AGGCCGCGCG CGGCGAGACC CTGGCCCGCC TGGGCCAGGC CGTGGTCCGC GCCCCGGTCT CGGGCCTGAT CAGCCGTCGC AGCGTCACCA AAGGCCAGAT CATCTCGCCC GGAACCGAGC TGTTCCGCAT CGTCCGCGAC GGCCGCCTTG AGCTGGACGC CGAGATTCCC GAATCCGACC TGTCGGCGCT GCGCGCCGGC ATGCCCGCCA CGGTCACCTC CGACCAGGTC GGCCAGACCA CGGGGACGAT CCGCATCGTC ACCTCCGAGG TCAACACCCA GACCCGCGTC GGCCTGGCCC GCATCAGCCT GGCGCCGGGC AGCGGCTTCC GCTCCGGCAT GTTCGCCCGC GCCCAGATCG CGGCGGGCTC CCAGCCGGCC CCGACCATCC CGACCGCCGC GATCCTCTAT CGCCAGAACC AGGCGGGCGT GTTCGTCGTT GGCGCCAACA ATCGCGCCCA GTTCCGGCGC ATCGACATCC TGGCTCGCAA CGCCGACCGC ACCGCCGCGG GCGGGCTGAA CCCCGGCGAG CGAGTGGTGG TCGAGGGAGC CGGCTTCCTG GGCGACGGCG ACGCCGTGCG CGTCGCCCCG ACCTCCGGCA AGGCCCCGGC GCCCGCCGTG GCCGTCGCGG CGAAACCCTA G
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Protein sequence | MVVHQRINRR GLRSTALPVV LCIGALSLAA CDHNDKAKAK ATKPSQAASQ TVGVAVVTVQ ALPRIINASG TVTPWEEVPV GAETGGLTAV SVNAEEGQTV RQGQVLVAMN DTMLRAQARQ QEASVASARA TLAEAQSALA RSRELQAKGY LAASALDTAN MRQQTASAQV AAAEAARGET LARLGQAVVR APVSGLISRR SVTKGQIISP GTELFRIVRD GRLELDAEIP ESDLSALRAG MPATVTSDQV GQTTGTIRIV TSEVNTQTRV GLARISLAPG SGFRSGMFAR AQIAAGSQPA PTIPTAAILY RQNQAGVFVV GANNRAQFRR IDILARNADR TAAGGLNPGE RVVVEGAGFL GDGDAVRVAP TSGKAPAPAV AVAAKP
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