Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0859 |
Symbol | |
ID | 5898314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 913372 |
End bp | 914448 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641561341 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001682488 |
Protein GI | 167644825 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.103042 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATC CCCGAACCCC GCCGCTCGCC CCGCCGCCGC CCAAGCGGAT GTGGTCGCGC GCGGCGATCC CGGCGATGGT CGCCGGGCTG GGCGGGGTGC TGCTGGTGCT CTACGCCTGG AAGCTGCCGC CGTTCACCAC CACAATGCAG GGCACCGAGA ACGCCTATGT ACGCGGCTAC GTCACCCAGT TGGCCCCCAA GGTCGACGGC TATGTGACGG CGGTGACGGT GAAGGACTTC GAGACGGTGC GCGCCGGCCA GGTGCTGGTC CAGATCGACG ACCGCATTTA TCGCCAGAAG CTGGCCCAGG CGGCGGCCAG CGTGCAGGCC GCCCAGGCCG CGCTCGACGC CAACCTCCAG GCCCAGACCA GCAACGCCGC CCAGATCCGG CTGGCCCAGG CGCAGGCGGA GAGCGGTCGC GCGGCCCTGG CCAAGGCCCA GATCGACGTC AGGCGGGCCG AGCCGCTGCT GGCCCAGGGC TGGCTGGCCC CCAGCCAGCG CGACGTCCTG CAGGTCGCCC AGCGCCAGGC CAGCGCCGGC GTCGCCCAGA CGGCGGCCAA TATCGACATC GCCCGTCAGG CCCTGGCCAC CACCAAGGTC AATCGCGAGT CGCTGCAAGC CTCGCTCGCC AACGCCCAGG CCGCGGTCGA GCTGGCCCGC ATCGACCTGG CCAACACCAC CATCCGCGCC CCGGAGGACG GCGCCGTGGG CGAGGTGGGG GTGAAGCTTG GCCAATATGT TCCGGTCGGA ACCCTGCTGA TGGGCGTGGT GCCGCGCGAG ACCTGGGTGA CGGCCAATTT CAAGGAGACC CAGACCGCCC ACATCCGGGT TGGTCAGCGG GCGGTGGTGC GGGTCGACGC CTTGGGCGGG ATGACGCTGC GCGGCCATGT CGAGCGGCTG GGGCCGGCCG CCGGCTCGGA GTTCGCGGTG ATCAAGCCCG ACAACGCCAC CGGCAACTTC ACCAAGGTGG TCCAGCGCCT GCCGGTCCGC ATCGTGCTCG ACCCGAACCA GGAGGGCGTG GCCCGCCTGC GGCCGGGCAT GAGCGTTGAG GCCCGGGTCG ACACGGCCGA CCGCTGA
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Protein sequence | MSDPRTPPLA PPPPKRMWSR AAIPAMVAGL GGVLLVLYAW KLPPFTTTMQ GTENAYVRGY VTQLAPKVDG YVTAVTVKDF ETVRAGQVLV QIDDRIYRQK LAQAAASVQA AQAALDANLQ AQTSNAAQIR LAQAQAESGR AALAKAQIDV RRAEPLLAQG WLAPSQRDVL QVAQRQASAG VAQTAANIDI ARQALATTKV NRESLQASLA NAQAAVELAR IDLANTTIRA PEDGAVGEVG VKLGQYVPVG TLLMGVVPRE TWVTANFKET QTAHIRVGQR AVVRVDALGG MTLRGHVERL GPAAGSEFAV IKPDNATGNF TKVVQRLPVR IVLDPNQEGV ARLRPGMSVE ARVDTADR
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