Gene Cagg_3815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3815 
Symbol 
ID7266295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4654141 
End bp4655628 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content65% 
IMG OID643568627 
ProductCRISPR-associated RAMP protein, Cmr1 family 
Protein accessionYP_002465087 
Protein GI219850654 
COG category 
COG ID 
TIGRFAM ID[TIGR01894] CRISPR-associated RAMP protein, Cmr1 family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.433858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.206813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAAAG AATGGAAGCT CCAAGCCCAC ACCGACATCT GGACCGGAGA CGCGGCAGGG 
AAACCCGACC GCCTCATCCC CACCGGCATC ATAGGATCGC TGCGCTGGTG GTTTGAGGTG
CTGGTGCGCG GCCTCGGCGG CAAGGCGTGC GACCCCACGT CGGATATACG CTGCCCGGAC
AAGGACGGTC GGCACTGCGT GGTCTGCGAA CTCTTCGGCT GCACCGGCTG GGCGCGCAAG
TTCCGGCTCA TGATTCTGGA CGATAAGGGT CAGGACATTC AGAACCAGAT CAAGGCAAAT
CAAACCTTCA TCCTGCGCTT CATCCCCCTA CGACCGATTC GGGACGAGGA GTGGTGCCTG
CTCGACGCCA CCCTGCGCCT GATCGCCGAG TACGGAGCGA TAGGCGGGAA GACGGTGTTC
AAGCCGTCGG ATCAGCAGAA TAGGCAGAAT GCACCTCATC ATAAAGACTT TGGGCTTGTG
GAGTACATAG AAGGCCCTCA AGGCTGGCAG TGTAACAAAA CGCTTAAAGA CATCCGAGGC
TATGTGACCG GCAGCAACTG GCGCAAAGCG CCACATTCAT ACCAAGACCA TAAAGATCGC
CTACACGATT TCTCCTGGGC TTCGCTGCAA AACTTCTGGT GTGTGAAAGG GCGGTATCTG
GCGAGGCAGA ATAATCAAAA AAGTTCTTTC AATCGTGTTA TCGGCCGCCC AGAGCCAAAG
CACCAATCCG CGCAAGGTGA TTCTTGGTTG GCTGGAAGGC GGCCTAACCG GCAACAAGGT
ATCGAGCCAG AGAGCAAGAA GGTGTTCAGT TTCAAGCACC CGGAAGAGGG CAGGCGCACC
TTCGGCTTTG TAAAGCCGGG GCAGCCGGGG CAGCCGGGGC AGCCGGGGCA GCCGGGGCAG
GCCGGGCAAC CGGGACAGCC GGGGCAGCCG GGGCAGCCGG GGCAATCGGG GCAGCCGGGG
CAGGCCGGGC AACCGGGGCA GCCGGGGCAG GCCGGGCAAT CGGGGCAGGC GGGGCAGCCG
GGGCAGCCGG GGCAGCCGGG GCAACCGGGG CAACCGGGGC AGCCGGGGCA ACCGGGGCAG
GCGGGGCAGG CGGGGCAGCC GGGGCAACCG GGGCAACCGG GGCAGCCGGG GCAGCCGGGG
CAACCGGGGC AGGCGGGGCA GCCGGGGCAG CCGGGGCAGC CGGGGCAGGC CGGGCAACCG
GGACAGCCGG GGCAGCCGGG GCAGCCGGGG CAATCGGGGC AGCCGGGGCA GGCCGGGCAA
CCGGGGCAGG CCGGGCAACC GGGGCAGCCG GGGCAGGCCG GGCAATCGGG GCAGGCGGGG
CAGGCGGGGC AGCCGGGGCA GCCGGGGCAA CCGGGGCAGC CGAACTCGGT GAGTTTTGAC
GAGATGAAAG AACGCCTTAA GCAAGCCTGG AATAACTTTC GAGACGATGA ATTCCTAACA
GGCGAGCAAA TCTTAAACGA ACTGTTTCAT AGGAGGAATG GCGCATGA
 
Protein sequence
MVKEWKLQAH TDIWTGDAAG KPDRLIPTGI IGSLRWWFEV LVRGLGGKAC DPTSDIRCPD 
KDGRHCVVCE LFGCTGWARK FRLMILDDKG QDIQNQIKAN QTFILRFIPL RPIRDEEWCL
LDATLRLIAE YGAIGGKTVF KPSDQQNRQN APHHKDFGLV EYIEGPQGWQ CNKTLKDIRG
YVTGSNWRKA PHSYQDHKDR LHDFSWASLQ NFWCVKGRYL ARQNNQKSSF NRVIGRPEPK
HQSAQGDSWL AGRRPNRQQG IEPESKKVFS FKHPEEGRRT FGFVKPGQPG QPGQPGQPGQ
AGQPGQPGQP GQPGQSGQPG QAGQPGQPGQ AGQSGQAGQP GQPGQPGQPG QPGQPGQPGQ
AGQAGQPGQP GQPGQPGQPG QPGQAGQPGQ PGQPGQAGQP GQPGQPGQPG QSGQPGQAGQ
PGQAGQPGQP GQAGQSGQAG QAGQPGQPGQ PGQPNSVSFD EMKERLKQAW NNFRDDEFLT
GEQILNELFH RRNGA