Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3483 |
Symbol | |
ID | 7267506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 4247644 |
End bp | 4248957 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643568292 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002464759 |
Protein GI | 219850326 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTGCTT GCATTGCCCG CGCCGCGGCG CTGATCGGCG TTGCGGCGCT GATCTGCATT GCATGCGCTG CGCCGGCACC CGCGCCAACG CCGACGGTGA CCGTGACCGC AGCGCCCACA ACGACCACAG CGCCTACGGC GACCGCAATG CCCGCTGCTA CGCCTACAGC ACCGCCAACG GCCACACCGG TCACCCGTAA TTTAACCATT TGGGTTGCCG AACTCCCTGA TGCACAGGCG GTAGTTGCTA GCGAACTACA CCGAGCAGCA CAGATCGGCG ATCTCCACGT AACAATTGTG CCCCGTGATC CTGATGGGTT GCTCATTAGT CTCGCCACCG ATCACCTGCT CGGCCTGCCG CCGCCCGACC TGATCTGGGC CGATCAAGAG GCACTGGTAG GGTTGTTAGC CGATAACGCG CTAGCACCGA TTGGCATCGA GCTGCCGGCT GACCTCTTGC CCGGCTTGCG TACTCTGGCG AGTAGCAACA ATACGCTGTG GGGAGCACCG ATCACCGCCC AAGATATGCT GCTGCTGCTG TACCAGCTCG ATTGCTCACC GCCGGCGACG GCTGCCGATT TGGTGGCGGC AGCGCAAGCG GCCCGCACAT CCGAACGGGC CGGATTTGTG CAAGGCTGGG GGGCGGCGCG CTGGCTAGCG CCATGGTTCT ACGTTGCCGG CGGCGCCTTT ACCACCCCCG ACGGCGCTGA GCCAACCCTC GACACACCGG CAATGACGAC CACCCTTACC CTCCTTCGCG ATCTCTACCG GGCTGCGCCG CACAACGGCG ATAGTTATAC GCGCGGTCAA CGTCTGCTGA CCCAAGGGTT TGCCGCCTAT GCAATCGATG GTGACTGGGC TTGGGCGACC TATCGCGCCA TCAGCGATAC GTTCCAGATC GGGATCGCAC CACTCCCCTC GTTCAACGGT AATCCGACCC GCCCACTGAT CGGCGGCAGC CTGTTGATGC GCCATCGGGA TGGACAAGCC ACACCAGAGG ATGTGACAAC ACTGATCACA ACCCTCTATC AACCAGAGGT GCAACTGCGG CTGAGCGCAG CTTTAGGCCG CCTACCGGCC CGGCGTGAGC TGCTAACCGA TGCCAGCATT CAAACCGATC CAGTCCGTGC TATAGCCGCG ATGCAAGTGA CCGATGCCCC CGGCCTTCCC CCAACACCTG CCGTCCGCTG CGCCATTTTC GGCGTTGAAT CGTACCTGTA CAGCGCCACC ACCGGCGATC TCCCCATCAA TGAAGCCCCT CTCCGTATGC AACGCGAAGC GTTGGCCTGC TTGCGCCAAT TTGTGCAACC CTAA
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Protein sequence | MIACIARAAA LIGVAALICI ACAAPAPAPT PTVTVTAAPT TTTAPTATAM PAATPTAPPT ATPVTRNLTI WVAELPDAQA VVASELHRAA QIGDLHVTIV PRDPDGLLIS LATDHLLGLP PPDLIWADQE ALVGLLADNA LAPIGIELPA DLLPGLRTLA SSNNTLWGAP ITAQDMLLLL YQLDCSPPAT AADLVAAAQA ARTSERAGFV QGWGAARWLA PWFYVAGGAF TTPDGAEPTL DTPAMTTTLT LLRDLYRAAP HNGDSYTRGQ RLLTQGFAAY AIDGDWAWAT YRAISDTFQI GIAPLPSFNG NPTRPLIGGS LLMRHRDGQA TPEDVTTLIT TLYQPEVQLR LSAALGRLPA RRELLTDASI QTDPVRAIAA MQVTDAPGLP PTPAVRCAIF GVESYLYSAT TGDLPINEAP LRMQREALAC LRQFVQP
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