Gene Cagg_2879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2879 
Symbol 
ID7267587 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3535585 
End bp3536689 
Gene Length1105 bp 
Protein Length367 aa 
Translation table11 
GC content57% 
IMG OID643567701 
Producthypothetical protein 
Protein accessionYP_002464176 
Protein GI219849743 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0818313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0522954 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGCTG AATTGCACGA AGAATTGGAA ACCATCCGCG AGCGCTTTGC TAACTTGCGA 
GGGCATCTTT GACTTAGCGG CGAAACAGGC CGAGATTGAA CAACTTGAAG TCCGGGCTTC
CGATCCTGAG TTGTGGAATA CACCGCGCGT CGCCCAAGAG TTGATGCAGC GGCTGACACG
GCTGAAAGAA GAGGTGGCGC TCTGGAATGA TCTCGACCAC CGGATGACCA GTCTGGCCGA
GCTGATCGAG TTGGCCGAGC AAGAGGGTGA CGAGTCGCTG GCGGCCGATC TTGCCGCTGA
GTTGCGCGCA GTGCAGCGTG AGGTAGCCCA GCGCGAGCTT GAGATCTTGC TCAGCGGTCC
TTATGATGAC CGTGATGCGT TTTTGTCGAT CCAAGCCGGC ATGGGCGGCA CCGATGCCCA
AGATTGGGCA GCGATGCTGC TGCGGATGTA CACACGCTGG GCAGAACGGC GTGGGTATAC
GGTGAACTTG ATCGACCTGA GTGAAGGTGA AGAGGCCGGG ATCAAGAGTG CAACCATCGA
AATCCGTGGG CCATACGCCT ACGGTTATGC CCGGGCCGAA GCCGGTGTTC ACCGACTGAT
CCGGCTATCA CCGTTCAACG CTGCTCATAC GCGCCAAACC AGCTTTGCCC GTGTCGAGGT
TATGCCCGAA GTGGATGACG CACCAGAGGT TGAGATTAAG CCGGAAGACC TACGTATTGA
TGTCTTTCGG AGTGGCGGTC ATGGGGGGCA AGGCGTCAAT ACCACCGACT CGGCAGTACG
GATCACCCAC TTACCGACGG GCATTGTGGT GACCTGCCAA AATGAGCGTT CGCAGATTCA
GAACCGCGAA ACGGCGCTGC GGGTTTTGCG GGCGCGTCTC CTCGAACGCG AATTGCAGCG
GCAGGCCGAA GAGCGTGCTC GTTTGCGCGG TGAATATCGT GAGGCGGCGT TTGGTAATCA
GATGCGTACC TACTATCTGC ACCCGTCAAC GCTCGTTAAA GATCATCGCA CCGATTACGA
AACGAGCAAT GTGCAGGCCG TACTCGATGG TGAGATCGAT CCGTTTATTG AAGCGTTCTT
ACGTGCAAAT GTACGGGAGT CATGA
 
Protein sequence
MLAELHEELE TIRERFANLR GHLDLAAKQA EIEQLEVRAS DPELWNTPRV AQELMQRLTR 
LKEEVALWND LDHRMTSLAE LIELAEQEGD ESLAADLAAE LRAVQREVAQ RELEILLSGP
YDDRDAFLSI QAGMGGTDAQ DWAAMLLRMY TRWAERRGYT VNLIDLSEGE EAGIKSATIE
IRGPYAYGYA RAEAGVHRLI RLSPFNAAHT RQTSFARVEV MPEVDDAPEV EIKPEDLRID
VFRSGGHGGQ GVNTTDSAVR ITHLPTGIVV TCQNERSQIQ NRETALRVLR ARLLERELQR
QAEERARLRG EYREAAFGNQ MRTYYLHPST LVKDHRTDYE TSNVQAVLDG EIDPFIEAFL
RANVRES