| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1997 |
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| Symbol | |
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| ID | 7268913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 2441979 |
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| End bp | 2443931 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643566828 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_002463321 |
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| Protein GI | 219848888 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.521686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGCTCG AATTATCCTC ACCAACCCGC AATCGTTATT TTTTCTTGCT TGATACGATC
TTGTTACCTA TTGCCGCCTA CTTGAGCTTT GTGGTACGTC TTGACGAATT ACCGTCAGGC
GCAGCACTTA TGGGTTGGTT TATACTGGCA GCGCTTGCCA CACCGATCCA CCTCTTTGTC
TTTCGACAAT TGGGTGTCTA TGCACGCTAT TGGCGCTACG CTTCCCTTGA CGAACTACTA
TTGCTTATTT CGGCGGTGTC ACTCGCTATG ATCATCGCCG CACCAACCAC GTTCATCGTT
GCCGGTATCA TACCAATGGC TCTCCTCCCG CGGTCGGTAC CGGTTATCTT CTTCTGTTTT
AACCTCGTTA TGACGATTGG GCCACGCCTG TTATCACGCC TGCACTGGCA CCATCAGCTA
ATGCAGCGCA AGCGTAAGGG TGAAATCAAC GGTAAGCAGC AACGAGTGTT GATTATGGGT
GCCGGCTCGG CTGGTACGAT GATCGCGCGT GAATTGCGTG ATAATCCGCA ACTTGGTATG
GTAGCGGTTG GGTTTCTCGA TGATGACCCG CTTAAGTTCG GTATGTGCAT CTATGGCATA
CCGGTACTCG GAAATCGCTT CGACATACCG CGCCTGGCCC GTGAATATAG TGCGCATCTG
GTCATCATCG CGATGCCTTC GGCCACCGGC AAAGAGATTC GTAGCATTGT CGAACTCTGT
GAGCGAACCG GGGTCAAAAC CAAAATTATG CCCGGTCTCT ACGAAATGCT CGACGGGAAG
GTTAGCGTTA ATCAATTGCG TAACGTGCAG ATTGAAGACC TATTGCGTCG GAAACCGGTG
CAGACCGACA TTGTCGCCGT CCATAATCTG TTGCGTGGCA AGCGCGTGAT GGTGACCGGT
GGGGGTGGCT CGATCGGTTC CGAACTCTGC CGTCAGATCC TGCGCGCCGA GCCGGCCGAG
TTGATAATCC TCGGTCACGG CGAAAACTCG GTGTTTACCA TCGAACAGGA GCTACGCCGG
CAAGTAACGT CTGCTACCCG TCTCACTACG ATCATCGCCG ATATTCGCTT TGCCGAGCGT
GTTATGCATA TCTTTGAACA ATACCAACCC GAGATCGTTT TTCACGCGGC AGCGCACAAG
CACGTGCCGT TGATGGAATT GCATCCGTCT GAAGCGGTGA CCAATAACGT ACTCGGGACG
CGCAATCTCC TGAGCGCGGC AATGCAGGTT AACGTGAGCC ACTTTGTGAT GATCTCGAGC
GACAAAGCTG TTAATCCCAC CAGTGTGATG GGGGCCACGA AACGGGTAGC CGAGCTGCTG
GTTCACGAAG CGGCCCGATT AACCGGACGA GCATACGTCG CAGTACGTTT CGGTAATGTG
CTCGGTTCAC GCGGATCGGT CGTATTGACG TTCAAGCAGC AGATCGCCGC CGGTGGTCCG
GTCACCGTTA CCCATCCGGA GATGCGCCGG TTCTTTATGA CCATCCCTGA AGCGGTGCAA
TTGACACTCC AAGCCTCGGT GTTGGGGAAG GGCGGCGAAG TGTTTGTCCT CGATATGGGT
GAACCGATCC GCATCGTCGA TCTCGCGCGC GATATGATCG AGTTGTCCGG TTTACAGGTC
GGACGCGATA TTGATATCGT CTTTACCGGC CTCCGTCCCG GCGAGAAGCT GTACGAAGAG
CTGTTTATCG AGGGGGAAGA ATATCAGCGC ACCGAGCACG CCAAAATCTT TATCGCACGC
AACGCTTCAC AGTTTGTCCC TCGCGCACTC GCCGATCAGA TCCGTATCCT TGAGATGGCA
GCCTTTCATG AAGATACGGC CTTGCTCCTC CGTACCTTGC ATCGGCTCGT TCCGACCTTC
AAACAACCGA TGCCACTACC GATGACTGAA CCCAAGCCGC GCGAACAGGC TGTGGGTGAA
CCGCTGTGGA AACGACAGAT GGCAAGCGAT TAA
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| Protein sequence | MKLELSSPTR NRYFFLLDTI LLPIAAYLSF VVRLDELPSG AALMGWFILA ALATPIHLFV
FRQLGVYARY WRYASLDELL LLISAVSLAM IIAAPTTFIV AGIIPMALLP RSVPVIFFCF
NLVMTIGPRL LSRLHWHHQL MQRKRKGEIN GKQQRVLIMG AGSAGTMIAR ELRDNPQLGM
VAVGFLDDDP LKFGMCIYGI PVLGNRFDIP RLAREYSAHL VIIAMPSATG KEIRSIVELC
ERTGVKTKIM PGLYEMLDGK VSVNQLRNVQ IEDLLRRKPV QTDIVAVHNL LRGKRVMVTG
GGGSIGSELC RQILRAEPAE LIILGHGENS VFTIEQELRR QVTSATRLTT IIADIRFAER
VMHIFEQYQP EIVFHAAAHK HVPLMELHPS EAVTNNVLGT RNLLSAAMQV NVSHFVMISS
DKAVNPTSVM GATKRVAELL VHEAARLTGR AYVAVRFGNV LGSRGSVVLT FKQQIAAGGP
VTVTHPEMRR FFMTIPEAVQ LTLQASVLGK GGEVFVLDMG EPIRIVDLAR DMIELSGLQV
GRDIDIVFTG LRPGEKLYEE LFIEGEEYQR TEHAKIFIAR NASQFVPRAL ADQIRILEMA
AFHEDTALLL RTLHRLVPTF KQPMPLPMTE PKPREQAVGE PLWKRQMASD
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