Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1699 |
Symbol | |
ID | 7269405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 2075282 |
End bp | 2075833 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643566541 |
Product | Peptidoglycan-binding LysM |
Protein accession | YP_002463036 |
Protein GI | 219848603 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1388] FOG: LysM repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.578392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTCGG AAACACTCTT GTGGTTATTA TTGGCGTTGA TCTTCGTTGG GCCTACGCTC GGTGCAATCC TGTTGCGGTT GTTTGAGCAT CGGATCGGTG ACGTAGGGAT GGTGGTAGGA TCGAGCCTGT TGTTGCTCAT TGCAGCGGTA GCATTGCTGA CAATCGCCCG CTCTTCGTTG CCACCGCTGC GGATCGGTGA TTTTACGCTG TTGCCGGCCT GGTCGCCGGT TGTCGAGGTG GAAGAAGATG TCGTGCCCGT CCTACCGACG ACTCCACCGT TGCCGACACT GACGCCACGG CCAACAGCGA CCGCGGAGCC GACGGCGACC CCGGCGCCGA CGGCAACCCC AGCGCCGACG GCGACCCCAG CGCCGACGGC AACCCCAGAA TCGGCGGGAG GCCCACGGCG CTACACCGTA CAATCCGGTG ATACACTACG GATCATTGCC GAGCGATTTG GTGTTTCGAT CGAAGCGATC TTACAGGCCA ATAATCTCAC ACCGGCCCAA GGGGACAACC TGCAAGTCGG ACAGGAATTG GTGATTCCAT GA
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Protein sequence | MLSETLLWLL LALIFVGPTL GAILLRLFEH RIGDVGMVVG SSLLLLIAAV ALLTIARSSL PPLRIGDFTL LPAWSPVVEV EEDVVPVLPT TPPLPTLTPR PTATAEPTAT PAPTATPAPT ATPAPTATPE SAGGPRRYTV QSGDTLRIIA ERFGVSIEAI LQANNLTPAQ GDNLQVGQEL VIP
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