Gene Cagg_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1156 
Symbol 
ID7267905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1425276 
End bp1426046 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content59% 
IMG OID643566000 
Producttranscriptional regulator, IclR family 
Protein accessionYP_002462502 
Protein GI219848069 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0417534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000481305 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTATGA TACAGTCAAT CGATCGCGCA TTTGACGTCT TAGAGGCACT AGCGCAAGCC 
GATGATGATC TAAGTGTCTC GGAATTGAGT GAGCAGCTCG ATCTCCCGTT AGCGACCGTG
CATCGCTTGC TCTCCAGTTT AGCAGCGAGA GGGTATGTGA CGCAAGAGCC AAGCACACGG
CGGTACGGGC CGGGGCCACG TCTCCTTGAA ATTGCTGCCC GTGCTGCTCA GAGCCGTCGC
TTCGACTTGA TCCGCATTGC GCGGGCCGAA TTAGCCAAAC TCACCGCCGA AACCGGTGAA
ACCAGTAATT TGATTATCCG GCAGGGCGAT GAGGCAGTCT ATCAAGAACA GATCCCAAGC
CCACATCTGG TGCGTATGTT CACCGAAGTA GGGCAGCGTG CGCCGTTGTA CTGCACCGGA
GGTGGCAAAG CGATCTTAGC GGCGCTGCCG GCTGCTGAAT TCGAACGGTA TCTGGCCAGT
GGCCACTTTG AGCGGTGGAC GAACAAAACC ATTACCGACC GTGACCGGTT GCGGGCCGAA
CTCGCGTTGG CGCGTGAGCG CGGTTTTGCC TTAGATGACG AGGAGCGCGA AGAGGGGGTA
TGTTGTGTCG CTGCACCGAT CTTCGACCGG CGCGGGCAGG TGGTCGGAGC GATCAGCTTA
TCAGGACCCT CAATCCGTCT TGATCGGGCA CGGGCCGAAG CGTTGGGGCC GCGGGTGCGT
GAGGCGGCGC TGGCGTGCAG CCGGCAGTTG GGCTATCGCG CTGATCATTG A
 
Protein sequence
MGMIQSIDRA FDVLEALAQA DDDLSVSELS EQLDLPLATV HRLLSSLAAR GYVTQEPSTR 
RYGPGPRLLE IAARAAQSRR FDLIRIARAE LAKLTAETGE TSNLIIRQGD EAVYQEQIPS
PHLVRMFTEV GQRAPLYCTG GGKAILAALP AAEFERYLAS GHFERWTNKT ITDRDRLRAE
LALARERGFA LDDEEREEGV CCVAAPIFDR RGQVVGAISL SGPSIRLDRA RAEALGPRVR
EAALACSRQL GYRADH