Gene Cagg_1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1054 
Symbol 
ID7268506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1304595 
End bp1305164 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content54% 
IMG OID643565899 
Productelongation factor P 
Protein accessionYP_002462404 
Protein GI219847971 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.636587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCGG GAACAACTTC AGATTTGCGT AACGGTATCG TCATTCGGTA CAACAACGAT 
CTGTATCAGG TCGTTGAGTT TCAGCACGTT GCGCCGGGCA ACTGGCGCGC CTTCGTGCGG
ATGAAGCTGA AGAGTCTAAC TACCGGTAAA GTCATTGAAG ATCGAGTACG GGCCGGTGCA
GAGATCGACA TTGTACGTAT CGAGCGCCGT CCGATGCAGT ACCTCTACCG CGAAGGCGAC
AGCTTCGTCT TTATGGACAA CGATACCTTC GATCAAATTC CGGTTTCGGC GGAGTTGGTC
GGTGATGCGG TGAAGTTTAT GAAAGAGAAT GAGACGGTTG ACCTTGTGTA CGACGCCGAG
AAGGATCAGA TTATCGGTGT CGAGTTGCCG ATCTTCGTCA ACCTGAAAGT GGTGGAGACG
ACGGTGGCGG TGCGCGGCGA CACGGCGACG AACGTAACCA AACCGGCTAC GTTAGAGACA
GGAGCGGTGA TTGAGGTACC GGCGTTTATC AATGAGGGTG ACGTGTTGAA GATCGATACG
CGCACCGGCG AATACATTAC GCGGGTGTAA
 
Protein sequence
MAAGTTSDLR NGIVIRYNND LYQVVEFQHV APGNWRAFVR MKLKSLTTGK VIEDRVRAGA 
EIDIVRIERR PMQYLYREGD SFVFMDNDTF DQIPVSAELV GDAVKFMKEN ETVDLVYDAE
KDQIIGVELP IFVNLKVVET TVAVRGDTAT NVTKPATLET GAVIEVPAFI NEGDVLKIDT
RTGEYITRV