Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0542 |
Symbol | |
ID | 7267039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 660961 |
End bp | 661902 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643565405 |
Product | ApbE family lipoprotein |
Protein accession | YP_002461917 |
Protein GI | 219847484 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.206913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGGC TACAGTTTCG CGCGATGGGT TCAACGATCA CGATCGTGAT CGATAGCGAT GATCCGACAG CTCGCCCAGC ACTCAACGTC GCCCGGCAAA CCTTTCTGCG CTACGAGCAG ATTCTGAGCC GCTTTCGTTC GCACAGTGAA CTGTCGGCGC TCAACCGACG TGCCGGTCGT GGGCCGGTGC GGGTTGGATA CACGCTGTGG CGTGCCGTGC AGCATGCCTT GCAGGCTGCG TCTGCCAGCA ATGGTATTGT TACGCCGACA GTCGGTGCCG CACTGGTCGC TGCTGGCTAC GATCGCGATT TTGCTACCCT CACCAATGGG GTCGTGCATC GGTTAGCCGC TGCCCATCCT TCTCCCGATT GGCGACACAT TCGGCTTGAT CCGCATCGAC GTACTATCAC TCTCCCCGCC GGGGTACAGC TCGATCTAGG AGGGAGTGCC AAGGGTTGGA CGGCGGCTAT CGTTGCCCGT CGCTTAGGGC GTCGCTTTCC CACGCTCGTC GACGCCGGTG GCGATATTGC CATCAGCGGT CCACAGCGCA ACGGTGCGCC TTGGCCAATT GAGGTAGCCG ATCCGCACAA TCCCGACAAT GGTCTCGAAC TTCTCTTACT CCGGCGTGGC GGGGTCGCTA CCTCCGGTAT CGATTATCGG CGTTGGCAAC AAGGTGATCG ATGGCAGCAC CATCTGATTG ATCCGCGTAC CGGTTCGCCT GCTGCCACCG ATATTTTGGC CGCAACTGTG GTTGCGCCCA GCCTTACCAT TGCCGAAATG GCGGCCAAAA CGGTCGTCAT CCTCGGCTCT GAGGCAGGTT TGCCCTGGCT CGCGACTCGT CCTCAACTGG CTGCTCTATT GATACGGCTT GACGGTACGA TCATTCGCAC GCCGAATCTT GCCCGCTATT GCTGGCAACC AACGGCAATC CCAACTGCAT GA
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Protein sequence | MQRLQFRAMG STITIVIDSD DPTARPALNV ARQTFLRYEQ ILSRFRSHSE LSALNRRAGR GPVRVGYTLW RAVQHALQAA SASNGIVTPT VGAALVAAGY DRDFATLTNG VVHRLAAAHP SPDWRHIRLD PHRRTITLPA GVQLDLGGSA KGWTAAIVAR RLGRRFPTLV DAGGDIAISG PQRNGAPWPI EVADPHNPDN GLELLLLRRG GVATSGIDYR RWQQGDRWQH HLIDPRTGSP AATDILAATV VAPSLTIAEM AAKTVVILGS EAGLPWLATR PQLAALLIRL DGTIIRTPNL ARYCWQPTAI PTA
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