Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0532 |
Symbol | |
ID | 7267029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 650948 |
End bp | 653758 |
Gene Length | 2811 bp |
Protein Length | 936 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643565395 |
Product | alpha-L-rhamnosidase |
Protein accession | YP_002461907 |
Protein GI | 219847474 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3408] Glycogen debranching enzyme |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGAT CGTTCATCAC CTTCTGGCTT ATTACGGCTT TACTTTGCCT CTTCTGGCCA AAACCGACTC AAGCATCCGA TCTCTGTTTT TGCGTTGCTA CTCCGATCTG GTGGCATAGC TCTACACCGG CAGCCCATGA AGTTGCGCTC TTCCGCCTTG TCATCGAGCG CGATACACTC GCCCCGAACG CAATCCTCTC TATCTTCGCC GATACACGTT ACGAAGTCTA CCTCAACGGC AAGTTCGTTG GGCGTGGTCC GGCACGATTC TCGCGTCAAC ATCGTGAATA CGATCAACTC TCGCTTGGCG ATCTCACACC GGGCAGGCAC GTGTTGATCG TCCGTGTCCA ATGGGCGCCC AATTTTCGGC GGAGCGAATC GGAGCGCCCG TTTTTATGGG CGCTTCTCCA GAGTGAGGGT CAAACGCTCG CCACCAGTGG TCCGCATTGG CAAACCCAAC CGCTCCTCGC CTACCGTAGT GATGCGGCTC CTGTTCATCG CTGGGGGCTA ATTGGGCCGA CCGAAATCGT TGATTTGCGT TTGTTACCAC CCGATTGGTC ACTTATGGGA ACAGAGTCCC CATGGCAACC GGCAGTTGCC GTCGAGGTGA CGCCGGCTCG GTTTACCGCC CGCTCGATAC CCTTAACGGT TGAAGTTGAT ATACCGATTC AGCGTATTAG CACCGGTTGG CTGGGGGAAG ACTTCGTCCC GATTGAGTTA TTGAGTAGCG AAGATCAGAC GCTCGTCCAG CTTCAAATAA AGCACCAGAC AATGCTTACA CTGGTAAGTT TACAAGACGA ACTTACCACA AATATAACGA TAAACGGAAA TCAACTCATC TGGCAACCCG CATCCGAACG ACCACCGGGC ATTGTTACTG CTTCGTATCC GGCAACTGTT GGGACGCATA CGCTGCGCGT CACCGGACTC AGTGAGCGAC CAGAAGGCTG GACGATATTC ATCTCGCGAG ACGGGTTAGC AAGCATACCG ACATTGAACG CTACAGCCCA CGCCGGACGG CGAGTATTGC TGGCGCCACC ACATCCCGAT CCACAAGCAG TCACTGTATC CGAGACACCC TCACCGACCC TATCCTTCCA ACCACCGGCC AGTTATGCCG TTCTTGACTT GGGGCGAACC GTGCATGGCA GGTTATACGC AGAGGTAGCA GGACCGGACG GGGCCACGGT TGACATTGGT TGGGATGAAC GATTATGGCA ACAAACTATT CCACTCCCAT TTCCCGGCGA GTTACACCCA GAATGGAACC AGGTCGATTC GTGGCGGCTT GATGGGCGCG AACAGCGTCT AACCACTATC GATACTCGAG CCGGGCGGTA CATCGTCATT GCGGTCTGGA GTAATGAACC GGTGGAGATA CGCAATATCC AGGTGCGTGA GGAACGGTAT CCGGTTACTC AAATTGGGTC ATTTGCGAGT GACGATCCGT TGTTAAATCG GATTTGGCAG GTCGGCGTCG ATAGCTTACT GCCAAATATG ACAGATGCCT ACACCGATAC GCCCTGGCGT GAACGAGGGC AATGGTGGGG CGACGCATTT GTATCCTATC ACATCAATCA AGTTGCCTTC GGCGACCAAT TATTGCTCCG GCGCGGGGTG CGGCAGCTTG CCGATGCGTT TACCGCCGAA GGAGCGCCGG CAGCGATGGC CCCACACGAT GGTGGACGAA TGCTCGATTA TGGGATGCTT TGGGTCCAAG CGATTGCTGA AGATTTGCAG CGAACCGATG ATCCGGCCTT GGCGCGTGAG TTGTGGCCGA CCATCATTCG TTTTCTCAAC CACCTTGCAA CGTACCGCCG TAACGATACT GGCCTGCTCG ACCTGCCGGC AGGGCATTGG TCACAAACGA CTTATCTCGA CAGCAGTGTG ACCGTTGCGC GCTATGGCCA GTCCACACCG GTGAATGCAA TGTATTACGG CACCCTGCGC GCCGCAGCCG CGATCGCTAT TGCGCTTGGC GAGACAGAAG CGGCAAACGA TTGGGAAAGC GAAGCGGCAT TGCTGCGCAA TCGAATCAAC CAGTACCTCT ATGACCAACC AAGACGTCGC TACATTACCA CGATCATCAA TAGCCAACCG ATAGCAGCCG ACCCATATGC GCAGGCCTTC GCGCTCGCGT ATGATCTCGT GCCGCCTACC GAAATCTCGG CGGTGGCCGA TGCTTTATTG AGCCTGATCT CGCGCGATCT CACCCATCCC AATCTCCAGC TCTACGGGAT GTTTTGGGCG TTAGAAGGAT TGCGCCGGGC TGGCCGGATC AACGAAGCAA TTCAATTGAT CAAAGAGTTC TACGGCTGGC AATTGGCACA GGGAGCCACT ACGTGGTGGG AACATCTGAA CAGCGATCGG TTTTGGTACG CGAGCCGTTC GCATAGCTGG AGTGGCGCGC CGACGTGGTT TCTGACCACC GCTATTGTGG GAGCGCGCCA AACCGGTCCA ACGACATGGG AGGTTATCCC GGCTTGGGAG AGTATGAATC ATGCAACGGG AATAATACCC TTGCTAACCG GCTCGCTCAC TGTAACATGG GAAAAGACCG ATTGTAGCTC CAGCAGGGTG AGAATTCAGG CGTCTGAAGG GACACAAGGA GCATTGCTGC TTCCGCCACC AACCGATTCA ACGGTGATCA CCCACAACGG GGAAGAAGTA TGGTCACCAA ATTATCACAA CGCTGCTATT AGCCAGATGG TAGACAGACG TATTCGGATA CCGCTCGGCG GTGGGCAAGC GCACATCATC GAACGACAGC AGGCGTGTTT TATGATCTGG ATACCTACGG TTCAGCACTG A
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Protein sequence | MQRSFITFWL ITALLCLFWP KPTQASDLCF CVATPIWWHS STPAAHEVAL FRLVIERDTL APNAILSIFA DTRYEVYLNG KFVGRGPARF SRQHREYDQL SLGDLTPGRH VLIVRVQWAP NFRRSESERP FLWALLQSEG QTLATSGPHW QTQPLLAYRS DAAPVHRWGL IGPTEIVDLR LLPPDWSLMG TESPWQPAVA VEVTPARFTA RSIPLTVEVD IPIQRISTGW LGEDFVPIEL LSSEDQTLVQ LQIKHQTMLT LVSLQDELTT NITINGNQLI WQPASERPPG IVTASYPATV GTHTLRVTGL SERPEGWTIF ISRDGLASIP TLNATAHAGR RVLLAPPHPD PQAVTVSETP SPTLSFQPPA SYAVLDLGRT VHGRLYAEVA GPDGATVDIG WDERLWQQTI PLPFPGELHP EWNQVDSWRL DGREQRLTTI DTRAGRYIVI AVWSNEPVEI RNIQVREERY PVTQIGSFAS DDPLLNRIWQ VGVDSLLPNM TDAYTDTPWR ERGQWWGDAF VSYHINQVAF GDQLLLRRGV RQLADAFTAE GAPAAMAPHD GGRMLDYGML WVQAIAEDLQ RTDDPALARE LWPTIIRFLN HLATYRRNDT GLLDLPAGHW SQTTYLDSSV TVARYGQSTP VNAMYYGTLR AAAAIAIALG ETEAANDWES EAALLRNRIN QYLYDQPRRR YITTIINSQP IAADPYAQAF ALAYDLVPPT EISAVADALL SLISRDLTHP NLQLYGMFWA LEGLRRAGRI NEAIQLIKEF YGWQLAQGAT TWWEHLNSDR FWYASRSHSW SGAPTWFLTT AIVGARQTGP TTWEVIPAWE SMNHATGIIP LLTGSLTVTW EKTDCSSSRV RIQASEGTQG ALLLPPPTDS TVITHNGEEV WSPNYHNAAI SQMVDRRIRI PLGGGQAHII ERQQACFMIW IPTVQH
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