Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1395 |
Symbol | |
ID | 3746579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 1858140 |
End bp | 1858910 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637773931 |
Product | anti-anti-sigma factor, putative |
Protein accession | YP_379696 |
Protein GI | 78189358 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.392973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACT CAATAACAAA CCGTAGAGAA CTCACCGTCC TAAAAATTGA GGAAGAGGTG TTTGACTTTC GTCATCGCGA CGATTTTACC CAAATCGTTG ATAGTTTGCT GCAACAAGAG GAGAGTAAAA ATCTTCTTAT TGATTTTTCG CCCGTAAAAG CCATTGACTC CGCTGGCATT GGAGCCATTT TGCAAGCTCA CCAATTAGCC AACCGCAATG CAGGACTTGC GGTGTTTGTA GCACTTTGCA AACAAATTAA AGACCTCCTT AAACTTACCA ATCTCGATAA ACAGCTCTAC ATTTTCTCCT CAATTAACGA GGTTATGACC TTAGTGGAAC CAAACGCTAA GCCCAAAAAG AACAATCGTG CAAAATCAGC CGCACCTGTG GATGAAATAG ATGAATTGCT GGGCGACGAC CTCGATATTA TTGGCGCTCC CGAACTTGGG GACGAAAAAC TTGCTGGCGT TATAGATGAT GAGCTTCATG TTGACGATAG CGAAGAAGAG CACGATAAGC CTGAAATGGA TGACGATGCC GATGAGGATG ACGATGAGCA TGTAGAAGAA GAAAAAGCGC CTGCCCCAAA AGAACCAAAA GCTGCAAAGG CGAAAAAAGA GCCAAAGCCA AAAAAAGAGA GCAAAACACC ACCAAAACCT GCTGCAAGCA AAGCTCCAGC AAAAACCACA ACAAAAGCTC CTGCAAAAGC TCCAGAAAAA ACCACGAAGC GCGCTCAGCC TAAAAAACGC GTTGAGAAGG AAAGCGAATA A
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Protein sequence | MKHSITNRRE LTVLKIEEEV FDFRHRDDFT QIVDSLLQQE ESKNLLIDFS PVKAIDSAGI GAILQAHQLA NRNAGLAVFV ALCKQIKDLL KLTNLDKQLY IFSSINEVMT LVEPNAKPKK NNRAKSAAPV DEIDELLGDD LDIIGAPELG DEKLAGVIDD ELHVDDSEEE HDKPEMDDDA DEDDDEHVEE EKAPAPKEPK AAKAKKEPKP KKESKTPPKP AASKAPAKTT TKAPAKAPEK TTKRAQPKKR VEKESE
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