| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8700 |
|---|
| Symbol | |
|---|
| ID | 8340082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 10084551 |
|---|
| End bp | 10085204 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644961781 |
|---|
| Product | Methyltransferase type 12 |
|---|
| Protein accession | YP_003119356 |
|---|
| Protein GI | 256397792 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4123] Predicted O-methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.257362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAGCG AGACCACCAC TGACTCCGCG ACCTTTTGGG AGAAGCACTA CGCGCGCTTC
GACCCCAGCT GGGGCACCAA GCCCAACGTC GTGCTGAAAG ACCTCCTCGC CACCTTCGCC
CCGCCGCCGG GCACCGCGCT CGACCTGGGA TGCGGCCACG GCGGCGACGC GATCTGGCTG
GCCACTCAGG GCTGGGACGT CACCGCCGTC GACGTCTCGC AGACCGCGCT GGACCGCGTC
GCCGAAGGGG CGTGGGCGGT CAGTGCGGCC GAACGGGTGC ATCCCGTCCG CCACGACCTG
GCCCAGACCT TCCCCGCGGG CGACTTTGAC CTCGTCTGCG CGACCTACTT CCACACGCCG
ATCGCGATCC CGCGCACTGA AGTGCTGCGC AAAGCCGCCC GCGCCGTGGC GCCGAACGGG
CTGCTGATCG TGGTGGAGCA CGCCTCAGTG GCGCCCTGGT CGTGGCAGGC TGGCCAGGAC
GTGAGCTTCC CGGCGCCCGA GGAGGTGCTG GCCTCGCTGG CGCTCGACGA CTTATGGCGC
GTCGAGCGGT GTGACGCACC TCAGCGGACT GCCACCGGAC CGCAGGGACA GAAGGCAACG
GTCACGGAGA ACATCATCGT GCTGCGCCGG ACTGCGATTG CGGCGTCGAA CTAG
|
|---|
| Protein sequence | MHSETTTDSA TFWEKHYARF DPSWGTKPNV VLKDLLATFA PPPGTALDLG CGHGGDAIWL
ATQGWDVTAV DVSQTALDRV AEGAWAVSAA ERVHPVRHDL AQTFPAGDFD LVCATYFHTP
IAIPRTEVLR KAARAVAPNG LLIVVEHASV APWSWQAGQD VSFPAPEEVL ASLALDDLWR
VERCDAPQRT ATGPQGQKAT VTENIIVLRR TAIAASN
|
|---|
| |