Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8638 |
Symbol | |
ID | 8340020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 10018443 |
End bp | 10018922 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644961720 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003119295 |
Protein GI | 256397731 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.280895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.673509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGCT CTGGCGCCGA CCTGGCACTT CTCCTGCTCG GAGGCTTCCG CTCGCTAGTG GACGGCGCGA CAGCCGAGCT GGCCCGCCGC GGCTACGAGG ACGTCCGCCC CGTCCACGAC TTCGCGATGC GCGCCATCGC CGACGGCGCC GGCAACGCCT CAGAACTGGG CCGCCGCCTG TCGGTCTCCA AGCAAGCGGC AGCGAAGACC ATCGCCGTCC TCCAGGACCG CGGATACGTC ACCCGCGGCA CCGACCCCCG CCATGCCCGC CGCATGCTCC TGCAAGTGAC ACCCCTCGGC TTCGAGGTAC TCCGGCAGGG CGAAGCCATC TTCGACGAGC TCCGCGAGCA ATGGGAACGA CAGATCGGCG CCACGCAGCT TCAGAACCTT GAGACCTACC TGGCGGCGCT GTCCGGCGAT CCAGCCGTGC GCTTCGACAC GCCTGGGTGG ATGTCGCGCG GTCTCGGCGA CTTGATGTAG
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Protein sequence | MSRSGADLAL LLLGGFRSLV DGATAELARR GYEDVRPVHD FAMRAIADGA GNASELGRRL SVSKQAAAKT IAVLQDRGYV TRGTDPRHAR RMLLQVTPLG FEVLRQGEAI FDELREQWER QIGATQLQNL ETYLAALSGD PAVRFDTPGW MSRGLGDLM
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