Gene Caci_8638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8638 
Symbol 
ID8340020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10018443 
End bp10018922 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content69% 
IMG OID644961720 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003119295 
Protein GI256397731 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.280895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.673509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCT CTGGCGCCGA CCTGGCACTT CTCCTGCTCG GAGGCTTCCG CTCGCTAGTG 
GACGGCGCGA CAGCCGAGCT GGCCCGCCGC GGCTACGAGG ACGTCCGCCC CGTCCACGAC
TTCGCGATGC GCGCCATCGC CGACGGCGCC GGCAACGCCT CAGAACTGGG CCGCCGCCTG
TCGGTCTCCA AGCAAGCGGC AGCGAAGACC ATCGCCGTCC TCCAGGACCG CGGATACGTC
ACCCGCGGCA CCGACCCCCG CCATGCCCGC CGCATGCTCC TGCAAGTGAC ACCCCTCGGC
TTCGAGGTAC TCCGGCAGGG CGAAGCCATC TTCGACGAGC TCCGCGAGCA ATGGGAACGA
CAGATCGGCG CCACGCAGCT TCAGAACCTT GAGACCTACC TGGCGGCGCT GTCCGGCGAT
CCAGCCGTGC GCTTCGACAC GCCTGGGTGG ATGTCGCGCG GTCTCGGCGA CTTGATGTAG
 
Protein sequence
MSRSGADLAL LLLGGFRSLV DGATAELARR GYEDVRPVHD FAMRAIADGA GNASELGRRL 
SVSKQAAAKT IAVLQDRGYV TRGTDPRHAR RMLLQVTPLG FEVLRQGEAI FDELREQWER
QIGATQLQNL ETYLAALSGD PAVRFDTPGW MSRGLGDLM