Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8458 |
Symbol | |
ID | 8339838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9795337 |
End bp | 9795789 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644961545 |
Product | methionine-R-sulfoxide reductase |
Protein accession | YP_003119122 |
Protein GI | 256397558 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.591706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0186574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGTACA AGGTTGAGCG CACCGAGGCA GAGTGGCGGC AGCACCTAGG GCCGGCCGCC TACAAGACCC TGCGCGAGTT CGGAACCGAG AACCCCTGGT CCGGCGCCTA TGTCGAGAAC GACGACTCGG GTATCTACCT GTGCCGGGGC TGTGACACCG CGCTGTTCGG CTCGCAGTCC AAGTTCAACG CCGAGTGCGG CTGGGCCGCG TTCGCCTCCC CGCTCACCGA CGACCTCATC GAGAAGTACG AGGACCGTTC GCAGGGCATG CTGCGCACCG AGATCCGTTG CTCCACCTGC GGATCGCACC TGGGCTACCT GTTCCAGGAC GCGCCGGAGG AACTCGGCGG GTGGCGCTAC TGCGTGAACT CGATCGGGCT GTTCCTGCGG GAATCCGTCT CCAGCGGGGC GTCGGGCAGC GCCTCGGGAA GCGTGTCCAG CACAGCGTCC TGA
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Protein sequence | MVYKVERTEA EWRQHLGPAA YKTLREFGTE NPWSGAYVEN DDSGIYLCRG CDTALFGSQS KFNAECGWAA FASPLTDDLI EKYEDRSQGM LRTEIRCSTC GSHLGYLFQD APEELGGWRY CVNSIGLFLR ESVSSGASGS ASGSVSSTAS
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