| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8341 |
|---|
| Symbol | |
|---|
| ID | 8339720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9665446 |
|---|
| End bp | 9666630 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644961427 |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_003119005 |
|---|
| Protein GI | 256397441 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCA CCGAGTCCTT CCGCGTCGCC TTCGACGCCC TGCTCGCCAA CCGGCTGCGC
TCCCTGCTGA CCATGCTCGG CGTGGTCATC GGCGTCGCCG CGGTCGTCGT CCTGGTCGCG
ATCGGCGGCG GCGCGAAGCA GCTGGTCACC TCCGAGGTCG AGGGCCTGGG CTCGAACATC
GTGTTCGTCG CGCCCGGCAA GTTCCAGCTC GGCACCTCCC CGGCCATCTC CCGGCTCCAG
CTCGCCGACG CCGACTACCT GGACCGGGTG CTCGGCCGGC CCGACGCCGT CGCCGTCTCC
CTGGCCTCGG CCGAGAACCT GCGCGCCGGG ACCAACACGT TCTACGCGAC GGTGCAGGGG
ACCACGGCGA ACGTCGTCGA CGTCTTCGAC CGGCCGGTCG CCGAGGGCCG GTACGTCTCC
AAGGCCGACA TCGCCACCGC GCGCCGGGTG ATCGTCCTGG GTCCCGACGC CGCCGCGGCG
CTGTTCCCGA ACGCCGATCC CATCGGACGC CAGGTGGACA TGGGCGGCGT CGAGTTCCGG
GTGATCGGGC TCTTCCAGCC CAAGGGCGGT GCCTTCGGCC TGAGCCCGGA CAGCGAGGTG
CACATCCCGG TCACCGCCGC GCAGCGGCTG TTCGGCATGC AGACCATCTC CGGCTTCGCC
ACCAGGGCCG ACAGCCCCGG GGACGTCGAC GCCACCGGCG CCGCGATGGT CGGCGCGCTG
AAGCAGAAGT ACCAGGGCGA CGAGTTCACG GCGGTGTCCC AGACCGAGAT CCTCGGCACC
ATCGGCAAGA TCCTGTCGAT GCTCACCCTG GTGCTCGCGG CGATCGCGGG CATCTCGCTG
CTGGTCGGCG GGGTCGGGGT GTCGAACATC ATGCTGGTGT CGGTCCGGGA GCGGACCAAG
GAGATCGGAC TGCGCAAAGC GCTGGGCGCG CGCCAACGCG ACGTCCTGTC GCAGTTCCTC
TTAGAGGCCG TGATGCTGAC GAGTATCGGA GGCGTCATAG GGATCGGACT CGGTATAGGC
GCGTCCTACG TACTCTCTTC CTTCACGCCG CTACCCGCGG TCCTCGCCTG GTGGTCGATC
GCGCTCGCGT TCGGGGTATC GGCCGCAGTG GGGGTGTTCT TCGGGGTGAT GCCTGCGCGG
AGAGCCGGGA AGCTCGATCC GGTGGTGGCG CTTCGGACCG AATAG
|
|---|
| Protein sequence | MRITESFRVA FDALLANRLR SLLTMLGVVI GVAAVVVLVA IGGGAKQLVT SEVEGLGSNI
VFVAPGKFQL GTSPAISRLQ LADADYLDRV LGRPDAVAVS LASAENLRAG TNTFYATVQG
TTANVVDVFD RPVAEGRYVS KADIATARRV IVLGPDAAAA LFPNADPIGR QVDMGGVEFR
VIGLFQPKGG AFGLSPDSEV HIPVTAAQRL FGMQTISGFA TRADSPGDVD ATGAAMVGAL
KQKYQGDEFT AVSQTEILGT IGKILSMLTL VLAAIAGISL LVGGVGVSNI MLVSVRERTK
EIGLRKALGA RQRDVLSQFL LEAVMLTSIG GVIGIGLGIG ASYVLSSFTP LPAVLAWWSI
ALAFGVSAAV GVFFGVMPAR RAGKLDPVVA LRTE
|
|---|
| |