Gene Caci_8128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8128 
Symbol 
ID8339506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9424653 
End bp9426191 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content71% 
IMG OID644961213 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003118792 
Protein GI256397228 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCGC TGACGCAAAC GTTCATGAAT CAGGGAGGGT TCACGATGAC CGCAACAGCG 
CTCGAGCCGG CGGGGGACAC GGCAATGGAG GCGACGCAAA CGATGGACGC GATGCCCGAG
CACATGGGCC GGCAGACCGA CGCGCACGGC GAAGGCAGAA CCGGCCCGAC GACCGCCCTC
GCCACCGCCG GGTCGCCCGC CGCCGAATCC ACGGCATCGC TCGCCGCCGG GTCTGCTCAG
GCTCCTGACA CGGCCGCGTC GCCTGCCGCG GCCGCCGCCC CCGAGCTGCT CCCGCTGCGC
CGCAACCGCA ACTTCAACCT CCTGTGGGGC GGCGCGGTCT CCGCCCTCCT CGGGCTGAGC
ACCGCCGACA TCGCCTACCC GTTGGTGATC CTGGCGCTGA CCGGGTCGCC GTTGAAGGCG
GGGCTGTTCG CGACCGTGCA GCTGATCGCG TCCGTGCTGG CGACGTTGCC GGTCGGGCAG
CTCATGGACC GCAAGGACCG TCGGCGGATG CTGTTGCTGT CGGAGTCGGT GCGGGTGGTG
GCGGCGGGAT CGGTGGCTGT CGCCTATTTC GTCGGGGCGC TGACCTTCTG GCATCTGCTG
CTCACCGCCG CTGCGCTCGG TGCCATTCAG CCCTTCGCCG GGGCTCGGAC GTTGTTGCTG
CGGCAGGTTG TGGCGCCGGA GCAGATTTCT GCCGCGCTCA CCGCCGAGCA GGTGCGGCAG
CAGGGGTGTG AGCTGGCCGG GCCGCCGTTG GGCGGGGCGA TGTTCGGGAT CTCGCGGGCG
CTGCCGTTTC TGTTCGCGAC GTTCGCCGGG TTGGTTTCGC TGCTCACCGT GGTGCTGCTC
AAGCTGCCGA AGTCTGTGAC GGTCGCTGCG GACCAGGGCG ACGCCGGCGC TTCCGACAAC
GACGCCGCCC CCGCCCCCAC AGCAGAGCAC GGAGGCGCCC TCCTCGGCCT GAAGACGATC
ATGCGCGACC CGGTGATGCG CGCGACCACG CTGGCGCTGT GCCTGGTGAA CACCGCCGGC
TACCCGGTCT TCCTGAGCCT GGTGGTGCGG ATGCAGCAGC ATCACGCCGG GTCCGGCACG
ACGGGGCTGG TCGTCGCCGC GATGGCGCTC GGCGGGCTGG GCGGGACGGC GTTGGTGAAG
CCGTTGCACA AGGTGCTGCG GCCGGGGTGG CTGCTGATCG TGGCGTGCCT GGTCTTCGCG
CTGACCAACT TCGGGATGAC GTTCTTCGCG GCTCCCCTGG CGGACGCGGT GTTCCTCGCG
ATCGGCGGCG CTGTCATCCC GTCCGCGGTG GTGATGGTCA ACGTGCTGAT CCTGCAGGCG
GTGCCGGACG AGCAGCGCGG GCGCACGGCC GCCGCGCTGG AGATGTTCCT GCTGATCGGC
ATGCCGGCCG GAATGCTGGT GGCCAGCGCG ACGCTCCAGT GGTTCTCGCC TACCGCGACG
CTGCTGGGCC TGTCGCTGCT GATGTCGGTC GCGGTGCTGT ACGCGGTGTC CCAGAAGGCG
CTGCGGGCCG CGCGGTGGCC GGAGGCCCGG CAGGCCTGA
 
Protein sequence
MVALTQTFMN QGGFTMTATA LEPAGDTAME ATQTMDAMPE HMGRQTDAHG EGRTGPTTAL 
ATAGSPAAES TASLAAGSAQ APDTAASPAA AAAPELLPLR RNRNFNLLWG GAVSALLGLS
TADIAYPLVI LALTGSPLKA GLFATVQLIA SVLATLPVGQ LMDRKDRRRM LLLSESVRVV
AAGSVAVAYF VGALTFWHLL LTAAALGAIQ PFAGARTLLL RQVVAPEQIS AALTAEQVRQ
QGCELAGPPL GGAMFGISRA LPFLFATFAG LVSLLTVVLL KLPKSVTVAA DQGDAGASDN
DAAPAPTAEH GGALLGLKTI MRDPVMRATT LALCLVNTAG YPVFLSLVVR MQQHHAGSGT
TGLVVAAMAL GGLGGTALVK PLHKVLRPGW LLIVACLVFA LTNFGMTFFA APLADAVFLA
IGGAVIPSAV VMVNVLILQA VPDEQRGRTA AALEMFLLIG MPAGMLVASA TLQWFSPTAT
LLGLSLLMSV AVLYAVSQKA LRAARWPEAR QA