| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7820 |
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| Symbol | |
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| ID | 8339196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9071685 |
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| End bp | 9074072 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644960904 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003118485 |
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| Protein GI | 256396921 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGAGC GGATCGCCGA GGCCCTGTCG GCCGGCGGCA TCATCACGCC GTTCCCGATC
CAGGCCGCGA CCATCCCCGT CGCGCTCACC GGCGCCGACG TGATCGGCCA GGCGAAGACC
GGCACCGGCA AGACGCTGGC GTTCGGCATC CCGGTCCTGC AGCGGATGGT GCGCGAGCTC
GCCATCGCCG CGGCCGCCGC GGAGAACGCC GCCGTCGGGA CGCTGGACGA GGCCGCCGTG
CCGGCCGAGG CCGACACCGA CGCCGCCACC CCTGACGCCG ACACCGCCAC GGCTCCCGCC
GCGACCGGCG CCGGCTCCGC ACGCGGCGGC GGACGCCGTC CCCGCGGGCG CGGCCGCAAG
CCCTCCGGCC CGGTGCCGGT CGGCATCCCG GGCCGGCCGC TCGGCCTGGT GGTCGTGCCG
ACCCGCGAGC TGGCCGTCCA GGTCACCGAG GACCTGGCCG CCGCCGGCAA GGTGATGGCC
GCCCGCGTGC AGTCCGTCTA CGGCGGACGC GCCTACGAGC CGCAGATCGC CGCGCTGTCC
GCGGGCGTCG ACCTGGTCGT CGGCACCCCC GGCCGGCTGC TCGACCTGGC CAAGCAGGGC
CACCTGGACC TGTCCGGGGT GCGCATGCTG GTCCTGGACG AGGCCGACGA GATGCTGGAC
CTCGGCTTCC TGCCGGACGT CGAGCGGATC GTCACCCAGG TCCCGAAGGA CCGCCAGACC
CTGCTGTTCT CGGCGACCAT GCCCGGCCAG GTCATCGCGC TGGCGCGGCA GTACATGAGC
CGCCCGACGC ACATCCGGGC CGCCGACCCG CACGACACCG GCACCACCGT CGCCAACACC
ACCCAGTGGA TCTACCGCGC GCACGCGCTG GACAAGACCG AGATGCTGGC CCGCATGCTG
CAGGCCGAGG GCCGCGGCCT GACCATGGTC TTCTGCCGCA CCAAGCGCAC CGCCGCGAAG
GTCGCCGAGG AGCTGGAATC GCGCGGCTAC GCCGCCGCCG CGGTCCACGG CGACCTCGGC
CAGGGCGCCC GCGAGCAGGC GCTGCGCGCC TTCCGCAACG GCAAGGTCGA CGTCCTGGTG
GCCACCGACG TGGCGGCCCG CGGCATCGAC GTCGAAGGCG TCACGCACGT GGTCAACTTC
CAGTGCCCCG AGGACGACAA GACCTACCTG CACCGCATCG GCCGGACCGG CCGCGCGGGC
GCGTCGGGCA TCGCCGTCAC CTTCGTGGAC TGGGACGAGG TCCCGCGCTG GAACCTGATC
AACAAGACCC TCGGACTCGA CTTCCACGAG CCGCGCGAGA CCTACTCGAC CTCGGAGTGG
TTCTTCAAGG AGCTCGGCAT CCCGGCCGAC GCCAAGGGCC GGCTGCTGAA GTCCGAACAG
ACCCGCGCCG GCCTGGCCGC CGAGGAGGTC GAGGACCTGG GTGAGACCGG CCGCGGCGCC
GGCGCGCGGG CCCGTGCCAC CACCACGACG CGCACCGCCG AGCGGCCCGC CCGCCCCAAG
CGAGAGCGGG TGCGCACCCG CGGCGCCCGC CGCGGCGGCG ACGAGATGGT GGGCGCCGAG
GACGCGCTGA CCGCCTCGGA CGCAGCCGAC GAGGTGCTGG ACGACACGTC CGGCGCCGAG
CGGCCGAAGC GCAGCCGCAC CCGGACGCGC AGCCGCGGCG GAGCCAAGCT CGACACCATG
GCGACCGAGT CCGCCGAGGC TGGCACTGTC GCCGTCGCCG ACGCCAGCGC TGTCATCGAG
ACCGCCGCAG ACGAGGCTGA GAAGCCGAAG CGCACGCGGA CCCGCACCCG GTCGAACGCG
GACGAGACGA GCGCCGTCGC CGCCGACGTC GCGGACACCA CCCCGGTGAC CGCCGACGCC
GACCCCGCGA CCGCCCCGTC GAGCACCGAC GAGACCGAGA AGCCGAAGCG CACGCGGACC
CGGAGCCGGG CGAACGCCGC CGAGGCGAGC AGCATCGCCA CCGACGCCAC TGCCGACGCC
ACCGCCGAGG CCGAGGCCGA CACCGCGGCT CTGCCGAGCG CGGAGGAGTC CGAGAAGCCG
AAGCGGACCC GTTCGCGCAG CCGGAAGCCG GAGGCCGAGC AGACCGAGGA AGCCGCGCTC
GTCACCGAGC CGGCCACCGC CGAGGTCACC CTGCCGAAGC AGGCGGGCCC GCGCAGCCGC
GCCAACGCGG CCGAGCAGAC CGCTGACACC GCCACCGCCG TCGAGGAGAC CGCCGAGCCG
AAGCGCACGC GGTCCCGCGG CCGGTCGGCC ACCGCGGTCG CGGAGACCGT CGAGGTGAGC
GTGGGCGCAG CCGACCCCGG CAAGCCCAAG CGCACCCGCC GCGCCCTCGC CGACGCCGAG
GGCCTCACCG CCACCGGCGT CGCGGTGACC GGCAACTACA ACTCCTAA
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| Protein sequence | MDERIAEALS AGGIITPFPI QAATIPVALT GADVIGQAKT GTGKTLAFGI PVLQRMVREL
AIAAAAAENA AVGTLDEAAV PAEADTDAAT PDADTATAPA ATGAGSARGG GRRPRGRGRK
PSGPVPVGIP GRPLGLVVVP TRELAVQVTE DLAAAGKVMA ARVQSVYGGR AYEPQIAALS
AGVDLVVGTP GRLLDLAKQG HLDLSGVRML VLDEADEMLD LGFLPDVERI VTQVPKDRQT
LLFSATMPGQ VIALARQYMS RPTHIRAADP HDTGTTVANT TQWIYRAHAL DKTEMLARML
QAEGRGLTMV FCRTKRTAAK VAEELESRGY AAAAVHGDLG QGAREQALRA FRNGKVDVLV
ATDVAARGID VEGVTHVVNF QCPEDDKTYL HRIGRTGRAG ASGIAVTFVD WDEVPRWNLI
NKTLGLDFHE PRETYSTSEW FFKELGIPAD AKGRLLKSEQ TRAGLAAEEV EDLGETGRGA
GARARATTTT RTAERPARPK RERVRTRGAR RGGDEMVGAE DALTASDAAD EVLDDTSGAE
RPKRSRTRTR SRGGAKLDTM ATESAEAGTV AVADASAVIE TAADEAEKPK RTRTRTRSNA
DETSAVAADV ADTTPVTADA DPATAPSSTD ETEKPKRTRT RSRANAAEAS SIATDATADA
TAEAEADTAA LPSAEESEKP KRTRSRSRKP EAEQTEEAAL VTEPATAEVT LPKQAGPRSR
ANAAEQTADT ATAVEETAEP KRTRSRGRSA TAVAETVEVS VGAADPGKPK RTRRALADAE
GLTATGVAVT GNYNS
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