| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7787 |
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| Symbol | |
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| ID | 8339163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9031101 |
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| End bp | 9032177 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644960871 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_003118452 |
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| Protein GI | 256396888 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.414411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCAC CCTCCTCCAT CCGGCTGGCC GTGATCCCCG GCGACGGCAT CGGCGTCGAG
GTCACCGCCG AGGCCCTGAA GGTCCTGCAG GCCGCGCTGC CGCAGGACGT GAAGGTGGAG
GGCACCGAGT ACGACCTCGG AGCCCGCCGC TACCACGCCA CCGGCGAGAC GCTTCCGGAC
GAGGTGCTCG CCGAGCTCCA GGGCTACGAC GCGATCCTGC TCGGCGCGAT CGGCGACCCG
AGCGTGCCCT CCGGGGTGCT GGAGCGCGGG CTGCTGCTCA AGCTGCGTTT CGCCTTCGAC
CACCACGTCA ACCTGCGGCC CTCGCGCCTG TTCCCGGGCG TACCCGGTCC GCTCAGGGAG
CCCGGCGCGG TCGACTTCGT CGTGGTCCGC GAGGGCACCG AGGGTCCGTA CACCGGCAAC
GGCGGGACCA TCCGCAAGGG CACGGTGCAC GAGGTGGCCA CCGAGGTCAG CCTCAACACC
GCCTACGGCG TCGAGCGCGT GGTGCGCGAC GCCTTCGCCC GGGCCCAGGC CCGGCCGCGC
AAGAAGCTGA CGCTGGTCCA CAAGACCAAC GTGCTGGTCT TCGCCGGCTC CCTGTGGAGC
CGGGTGTTCA CCGAGGTCGC CGCGGAGTTC CCCGAGGTGG CCACCGACTA CCTGCACGTC
GACGCCGCGA CCATCTTCCT GGCCACGCAG CCGGAGCGGT TCGACGTGAT CGTCACCGAC
AACCTGTTCG GCGACATCAT CACCGACCTC GCCGCCGCGG TCACCGGCGG CATCGGGCTG
GCGGCCTCCG GGAACCTGGA CGTCACCGGC ACGTTCCCGT CGATGTTCGA ACCCGTACAC
GGGTCGGCGC CGGACATCGC GGGCCAGGGC AAGGCGGACC CGACCGCCGC CGTGCTGTCC
GCGGCCCTGC TCCTGGAGCA CCTCGGACGG ACCAAGGCGA GTCCGGTCCT GTCCGAATCC
GCGCGCAAGA TCGAGGCGGC CGTGGAGGCC GACCTCGCCG AGCGCGCGGC GCACGACGCG
CCGCGGACGA CCTCCGAGAT CGGCGACGCG CTGGCGGCCA AGGCCGCCGG TCTGTAA
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| Protein sequence | MTAPSSIRLA VIPGDGIGVE VTAEALKVLQ AALPQDVKVE GTEYDLGARR YHATGETLPD
EVLAELQGYD AILLGAIGDP SVPSGVLERG LLLKLRFAFD HHVNLRPSRL FPGVPGPLRE
PGAVDFVVVR EGTEGPYTGN GGTIRKGTVH EVATEVSLNT AYGVERVVRD AFARAQARPR
KKLTLVHKTN VLVFAGSLWS RVFTEVAAEF PEVATDYLHV DAATIFLATQ PERFDVIVTD
NLFGDIITDL AAAVTGGIGL AASGNLDVTG TFPSMFEPVH GSAPDIAGQG KADPTAAVLS
AALLLEHLGR TKASPVLSES ARKIEAAVEA DLAERAAHDA PRTTSEIGDA LAAKAAGL
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