Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7197 |
Symbol | |
ID | 8338565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8365544 |
End bp | 8366401 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644960278 |
Product | NmrA family protein |
Protein accession | YP_003117867 |
Protein GI | 256396303 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGTT TGACCGTGGT CACCGGAGCG ACCGGCAATG TCGGTGGTTC GTTGGTGACG GCTTTGGTCG CGGCGGGTAT GCCGGTGCGC GCGGTGGTGC GCTCTGAGGC GGACGCGGCG CGCTTCGACA GCGGCGCGGT ACAGACCGCG ATCGGCGACC TGAACGAGCC CGCGAGCCTG GCGGCCGCGT TAGATGGTGC GCAGGCGCTG TTCCTGCTGC CCGGCTACGC GGACATGCCC GGCGTGTACG CGGCGGCGCG CGAAGCAGGG GTCGGACATG TCGTGCAGCT GTCGGGGATG TCGGCGGCGA GCGGCGACAT GAGCAACGCC GTCACCGAGT ACATGGTGCT CAGCGAGCAG GCGGCGGCGG AGTCGAAGCT GCCGCACACC GTCGTGCGGC CCTCGGCGTT CATGACCAAC GCGCTGCGGT GGGCGGACCA GGTGCGCGCC GGCGACACGG TGACGCTGCC GTTCCCGACC GTCGCCACCG CCTGTCTGCA CCCGGCGGAC CTGGGCGCCG TCATCGCCGC GGTGTTCGCC GACCCGGACC GGTACGCCGG CGAGGTGCTG CTGCCCACCG GTCCGGAGGC GCTGCTCCCC CGCGACCAGG TCGCGATCGT GGCCGGCGTC CTGGACCGGC CGCTGACCTT CGTGGGGCTC ACCGACGAGC AGGCGCGCGA GTCCATGGCC GCCGACGGCA CGCCGCAGCG GTACATCGAC GCCTTCCTCG ACTTCTACGC CAAGGGGAGT CTGGACGAGT CGCCGGTGCG CTCCACCGTC GCCGACGTCA CCGGCAACGC GCCCCGGACG TTCGCCGCCT GGGCTGCGGA CAACGCCGAG GCGTTCGCGC GCAGCTGA
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Protein sequence | MSGLTVVTGA TGNVGGSLVT ALVAAGMPVR AVVRSEADAA RFDSGAVQTA IGDLNEPASL AAALDGAQAL FLLPGYADMP GVYAAAREAG VGHVVQLSGM SAASGDMSNA VTEYMVLSEQ AAAESKLPHT VVRPSAFMTN ALRWADQVRA GDTVTLPFPT VATACLHPAD LGAVIAAVFA DPDRYAGEVL LPTGPEALLP RDQVAIVAGV LDRPLTFVGL TDEQARESMA ADGTPQRYID AFLDFYAKGS LDESPVRSTV ADVTGNAPRT FAAWAADNAE AFARS
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