Gene Caci_7197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7197 
Symbol 
ID8338565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8365544 
End bp8366401 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content72% 
IMG OID644960278 
ProductNmrA family protein 
Protein accessionYP_003117867 
Protein GI256396303 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGTT TGACCGTGGT CACCGGAGCG ACCGGCAATG TCGGTGGTTC GTTGGTGACG 
GCTTTGGTCG CGGCGGGTAT GCCGGTGCGC GCGGTGGTGC GCTCTGAGGC GGACGCGGCG
CGCTTCGACA GCGGCGCGGT ACAGACCGCG ATCGGCGACC TGAACGAGCC CGCGAGCCTG
GCGGCCGCGT TAGATGGTGC GCAGGCGCTG TTCCTGCTGC CCGGCTACGC GGACATGCCC
GGCGTGTACG CGGCGGCGCG CGAAGCAGGG GTCGGACATG TCGTGCAGCT GTCGGGGATG
TCGGCGGCGA GCGGCGACAT GAGCAACGCC GTCACCGAGT ACATGGTGCT CAGCGAGCAG
GCGGCGGCGG AGTCGAAGCT GCCGCACACC GTCGTGCGGC CCTCGGCGTT CATGACCAAC
GCGCTGCGGT GGGCGGACCA GGTGCGCGCC GGCGACACGG TGACGCTGCC GTTCCCGACC
GTCGCCACCG CCTGTCTGCA CCCGGCGGAC CTGGGCGCCG TCATCGCCGC GGTGTTCGCC
GACCCGGACC GGTACGCCGG CGAGGTGCTG CTGCCCACCG GTCCGGAGGC GCTGCTCCCC
CGCGACCAGG TCGCGATCGT GGCCGGCGTC CTGGACCGGC CGCTGACCTT CGTGGGGCTC
ACCGACGAGC AGGCGCGCGA GTCCATGGCC GCCGACGGCA CGCCGCAGCG GTACATCGAC
GCCTTCCTCG ACTTCTACGC CAAGGGGAGT CTGGACGAGT CGCCGGTGCG CTCCACCGTC
GCCGACGTCA CCGGCAACGC GCCCCGGACG TTCGCCGCCT GGGCTGCGGA CAACGCCGAG
GCGTTCGCGC GCAGCTGA
 
Protein sequence
MSGLTVVTGA TGNVGGSLVT ALVAAGMPVR AVVRSEADAA RFDSGAVQTA IGDLNEPASL 
AAALDGAQAL FLLPGYADMP GVYAAAREAG VGHVVQLSGM SAASGDMSNA VTEYMVLSEQ
AAAESKLPHT VVRPSAFMTN ALRWADQVRA GDTVTLPFPT VATACLHPAD LGAVIAAVFA
DPDRYAGEVL LPTGPEALLP RDQVAIVAGV LDRPLTFVGL TDEQARESMA ADGTPQRYID
AFLDFYAKGS LDESPVRSTV ADVTGNAPRT FAAWAADNAE AFARS