| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7030 |
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| Symbol | |
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| ID | 8338396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 8172071 |
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| End bp | 8173210 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644960110 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_003117701 |
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| Protein GI | 256396137 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.417643 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTTCCC CAGACAAAGC GATCCTCACT CTCGGCTCGC TGCCCGTTGC GCCGCCCGTG
GTGCTCGCCC CCATGGCCGG CATCACCAAC GTGGCGTTTC GCCAGCTCTG CCGCGAGCAC
GGAGCCGGCA TCTACGTCTG CGAGATGGTC ATGACCCGCG CCCTGGTGGA GCGGAACGAG
AAGACCCTGC GCATGGTGAA GTTCGCAAGC GACGAGAAAC CGCGCAGCCT CCAGTTGTAC
GGAGTGGATC CCGTCACAGT CCGCAAGGCG GTGGAGATGA TCGCCGCCGA GGACCTCGCC
GACCACGTGG ATATGAACTT CGGATGTCCG GTCCCGCGCG TCACGCGCAA GGGCGGCGGC
GCGGCCCTGC CCTACAAGCG CCGGCTGTTC GGCCAGATCG TCGAGGCCGC GGTCCAGGCG
GCCGCCCCGG CGGGCATCCC GGTCACCGTC AAGATGCGCA TCGGCATCGA CGAGGAGCAC
CACACCTTCC TGGAGGCCGG ACGCATCGCC CAAGAAGCCG GCGCCGCCTG GGTCGCACTG
CACGGCCGAA CCGCGGCCCA GCGTTACAGC GGCGAAGCGG ACTGGAGCGC GATCAAGGCC
CTGAAGGACG AACTCGAGGT CCCGGTCCTG GGCAACGGAG ACATCTGGGA AGCCGACGAC
GCGCTCCGCA TGATCGCCGA GACCGGCGCC GACGGCGTGG TGGTCGGACG CGGTTGTCTG
GGACGTCCGT GGCTATTCGC TGATCTCGCC GCAGCGTTCG ATGGTCGGCA CGAGCGCAAG
CTCCCCGCTC TCGGCGAGGT CATGGCGACC ATGCGCCGGC ACGCCGAACT GCTCGCCTCC
TGGCTCGGCA CCGAGCGCGA GGGCGTCGTG GACTTCCGCA AGCACGTCGC CTGGTACCTC
AAGGGCTTCC CGGTCGGCGG CGACGTCCGC CGCGGCCTGG CGATGTCCTC CTCGCTGGCC
GAGCTCGACG GCTTCTTCGC GCACCTGGAC CCGGCCACGC CGTTCCCGAC GGACACCCTG
GGCAAGCCGC GCGGGCGCAC CAACTCCCCG GGCAAGGTCA CGCTCCCCTA CGGCTGGCTC
GACGACCGGG ACGACGACAC CGTGCCGGCC GGCGCCGAGA TGGAGGACTC CGGCGGCTGA
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| Protein sequence | MTSPDKAILT LGSLPVAPPV VLAPMAGITN VAFRQLCREH GAGIYVCEMV MTRALVERNE
KTLRMVKFAS DEKPRSLQLY GVDPVTVRKA VEMIAAEDLA DHVDMNFGCP VPRVTRKGGG
AALPYKRRLF GQIVEAAVQA AAPAGIPVTV KMRIGIDEEH HTFLEAGRIA QEAGAAWVAL
HGRTAAQRYS GEADWSAIKA LKDELEVPVL GNGDIWEADD ALRMIAETGA DGVVVGRGCL
GRPWLFADLA AAFDGRHERK LPALGEVMAT MRRHAELLAS WLGTEREGVV DFRKHVAWYL
KGFPVGGDVR RGLAMSSSLA ELDGFFAHLD PATPFPTDTL GKPRGRTNSP GKVTLPYGWL
DDRDDDTVPA GAEMEDSGG
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