Gene Caci_6760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6760 
Symbol 
ID8338124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7802432 
End bp7803247 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content70% 
IMG OID644959853 
ProductBeta-lactamase class A-like protein 
Protein accessionYP_003117446 
Protein GI256395882 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0689983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGAGCG GCCCTGATTT CCCTGATGTG AGTGCTCTGC CGGGGACTCT CGCGTATGCG 
GTGCCCGGCT GGGGCGAGTA CTTGGCCGAT GAGGTGATGC CGCTGGCCAG TGTTGGGAAG
CTGCTGTTGC TTGCTTCGGT GGCGCAGGGT TTTGTGTCCG GCGAGCTGGA TCCTGGGGAG
CCGTTGGGGC TGCTCGAGCA GGACTTCAGT GCGGGCTCGG GGTTGCTGGT CACGTTGTCG
CCGCGGCGGT GGACCCTGCT TGACCTGGCG CGGCTGACCG CTGCCGTCAG TGACAACACC
GCTACCAATG CGCTGCTGCG GCGGGTCGGG GTGGAGCGGG TGGCGGCGGA TGCTGGGGCG
TTGGGGCTGG AGCGGAGTCG CGTTCTGGAT CGGATTCGTG AGCCTCGGCT GGCGGGCCAT
CCGCCGGCCT TTGCCGTCGG CACGGCGCGC GAGGTGGCGG CGCTCGCGGC CGTTGCCGCC
GGCGATCGGG GGTGGGGTGC GGTGCTTCTG GGGTGGATGG CGGGGTGTCT GGATCGGAGC
ATGGTGGCTG CCGGGATTGC GCACGATCCT GAGGACTCGG TGGTGCGTGA TGTGCCGTTG
TCTGGGCTGT GGGTCGCGAA CAAGACTGGC ACCGATGTCG GGACGCGCTG CGATGTCGGC
GTCGTGCGCG GCGCGCGGCA GGTTTGCTAC GCCGTGCTGA CGCGCTGCGC CGCCGGGCGT
GAGTTCGACA TGGTGCTGGC GATGCGCGAT GTCGGCGCCG TGGTGGGGCG GCTCGCGGGG
GCGGGAGGGT CAGCCTCGGC TGAAGCGGAC GGCTGA
 
Protein sequence
MVSGPDFPDV SALPGTLAYA VPGWGEYLAD EVMPLASVGK LLLLASVAQG FVSGELDPGE 
PLGLLEQDFS AGSGLLVTLS PRRWTLLDLA RLTAAVSDNT ATNALLRRVG VERVAADAGA
LGLERSRVLD RIREPRLAGH PPAFAVGTAR EVAALAAVAA GDRGWGAVLL GWMAGCLDRS
MVAAGIAHDP EDSVVRDVPL SGLWVANKTG TDVGTRCDVG VVRGARQVCY AVLTRCAAGR
EFDMVLAMRD VGAVVGRLAG AGGSASAEAD G