Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6467 |
Symbol | |
ID | 8337831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7459809 |
End bp | 7460462 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644959566 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003117159 |
Protein GI | 256395595 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.146665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGC CCGCAGACCC CCCTGCCAAC CGGCACGATC GTCGGCGTGC CGCCACACGC AGCGCGCTCA TCGGGGCTGC ACGCGAGATT CTCGCGCAGT CCACAGGCAC TGACATCAGT ATCCAGCGGA TCGCGGAGCA GGCGGACGTC GGCTTCGGCA CGTTCTACAA CCACTTCTCC ACCAAGGCCG AACTGTTCGA AGCCGCCTTG ACCGATTCCC TGGAGGAGTA CGGGCGCACC GTGGACGCGC TCACCGCGGA CATCGAAGAC CCCGCGGAGG TCTTCGCAGC CAGCGTCAGG CTGACCGTCC TCATGGTCGA ATCCGCCCCG CAGCTTATGC AGATCCTGCG CCGCCACGGC CTCGGCCAGC TCAACAGAAA CAGCGGCCTG GCACCCCGCG CGCTGCGCGA CCTGGAACGA GCCGCAGCCT CCGGACGCTT CGAGCTGAGC GACCCGCAAG CCACCCTGTT CGCCATCGGC GGCGCCCTCA TCGGACTGGT GGAATACCAG TTCAGCGAAC CGCCGCCGCC CAGCGCCCCC ACAGGGGAAT CCGTCGCCGA ACTCCTTCTG CGCATGCTTG GGCTCCCTGC GGAAGAAGCA CGCGAGATTG CCTCCCGGCC TCTGCCTCTG CCTCTGCCTC TGCCTGCACC GTGA
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Protein sequence | MTQPADPPAN RHDRRRAATR SALIGAAREI LAQSTGTDIS IQRIAEQADV GFGTFYNHFS TKAELFEAAL TDSLEEYGRT VDALTADIED PAEVFAASVR LTVLMVESAP QLMQILRRHG LGQLNRNSGL APRALRDLER AAASGRFELS DPQATLFAIG GALIGLVEYQ FSEPPPPSAP TGESVAELLL RMLGLPAEEA REIASRPLPL PLPLPAP
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