Gene Caci_6467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6467 
Symbol 
ID8337831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7459809 
End bp7460462 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content68% 
IMG OID644959566 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003117159 
Protein GI256395595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.146665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGC CCGCAGACCC CCCTGCCAAC CGGCACGATC GTCGGCGTGC CGCCACACGC 
AGCGCGCTCA TCGGGGCTGC ACGCGAGATT CTCGCGCAGT CCACAGGCAC TGACATCAGT
ATCCAGCGGA TCGCGGAGCA GGCGGACGTC GGCTTCGGCA CGTTCTACAA CCACTTCTCC
ACCAAGGCCG AACTGTTCGA AGCCGCCTTG ACCGATTCCC TGGAGGAGTA CGGGCGCACC
GTGGACGCGC TCACCGCGGA CATCGAAGAC CCCGCGGAGG TCTTCGCAGC CAGCGTCAGG
CTGACCGTCC TCATGGTCGA ATCCGCCCCG CAGCTTATGC AGATCCTGCG CCGCCACGGC
CTCGGCCAGC TCAACAGAAA CAGCGGCCTG GCACCCCGCG CGCTGCGCGA CCTGGAACGA
GCCGCAGCCT CCGGACGCTT CGAGCTGAGC GACCCGCAAG CCACCCTGTT CGCCATCGGC
GGCGCCCTCA TCGGACTGGT GGAATACCAG TTCAGCGAAC CGCCGCCGCC CAGCGCCCCC
ACAGGGGAAT CCGTCGCCGA ACTCCTTCTG CGCATGCTTG GGCTCCCTGC GGAAGAAGCA
CGCGAGATTG CCTCCCGGCC TCTGCCTCTG CCTCTGCCTC TGCCTGCACC GTGA
 
Protein sequence
MTQPADPPAN RHDRRRAATR SALIGAAREI LAQSTGTDIS IQRIAEQADV GFGTFYNHFS 
TKAELFEAAL TDSLEEYGRT VDALTADIED PAEVFAASVR LTVLMVESAP QLMQILRRHG
LGQLNRNSGL APRALRDLER AAASGRFELS DPQATLFAIG GALIGLVEYQ FSEPPPPSAP
TGESVAELLL RMLGLPAEEA REIASRPLPL PLPLPAP